CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0186800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.85 96.1 Os10g0186800 9638.m00950 - Nucleic acid-binding OB-fold domain containingprotein 8e+0 At5g55940 emb2731 (embryo defective 2731) S.X. H.G.
0.40 51.1 Os03g0679800 AK060719.1 - TPR-like domain containing protein 2e-1 At2g23320 WRKY15 S.X. H.G.
0.40 51.1 Os01g0922700 9629.m06891 - Hypothetical protein 7e-2 At1g27760 interferon-related developmental regulator family protein / IFRD protein family S.X. H.G.
0.27 27.5 Os01g0784700 AY327041.1 - Receptor-like kinase 2e-6 At4g21380 ARK3 (A. THALIANA RECEPTOR KINASE 3) S.X. H.G.
0.27 27.5 Os08g0425200 AK099569.1 - Conserved hypothetical protein 1e-1 At4g11870 unknown protein S.X. H.G.
0.26 25.6 Os10g0498300 AK060338.1 - Epoxide hydrolase 2e+0 At5g59870 HTA6 S.X. H.G.
0.24 22.4 Os02g0533200 9630.m03134 - SOUL heme-binding protein family protein 1e-1 At5g65495 unknown protein S.X. H.G.
0.21 17.9 Os08g0545700 9636.m04401 - TraB determinant family protein 6e-1 At5g52030 TraB protein-related S.X. H.G.
0.20 16.5 Os03g0708500 9631.m04889 - Viral coat and capsid protein family protein 7e-3 At1g73655 FK506 binding / peptidyl-prolyl cis-trans isomerase S.X. H.G.
0.18 13.7 Os01g0343500 AK071988.1 - TPR repeat containing protein 9e-10 At3g05625 binding S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.0 99.9 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
44.9 99.9 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
42.0 99.9 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
37.9 99.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
37.1 99.8 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
35.7 99.8 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
35.2 99.8 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
33.6 99.8 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
30.7 99.7 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.2 98.2 GSM173094 Rice OsSRT1 RNAi transgenic line LM3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Os02g0193100 AK109089.1 - Conserved hypothetical protein 4e-1 At2g44370 DC1 domain-containing protein C.G. S.X.
0.03 9e-1 36 Os05g0296900 AK100725.1 - Hypothetical protein 4e+0 At1g62840 unknown protein C.G. S.X.
0.03 9e-1 36 Os06g0231000 9634.m01230 - - 2e-1 At3g59870 unknown protein C.G. S.X.
0.02 2e+0 34 Os04g0344400 9632.m02613 - - 3e+0 At5g14440 - C.G. S.X.
0.02 2e+0 34 Os04g0444900 AK063657.1 - Zn-finger-like, PHD finger domain containingprotein 1e-11 At2g02470 AL6 (ALFIN-LIKE 6) C.G. S.X.
0.01 2e-1 38 Os08g0190300 9636.m00866 - Disease resistance protein family protein 3e-2 At3g24860 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 5e-1 36 Os01g0165200 AY336993.1 - - 3e-1 At5g01660 - C.G. S.X.
0.01 2e+0 34 Os05g0361200 CB677642 - Ferrochelatase II, chloroplast precursor (EC4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase)(Fragment) 4e-59 At2g30390 FC2 (FERROCHELATASE 2) C.G. S.X.
0.01 2e+0 34 Os06g0191200 AK073349.1 - Zn-finger, Ran-binding domain containing protein 4e-6 At1g55915 zinc ion binding C.G. S.X.
0.01 2e+0 34 Os07g0122900 AK070767.1 - Cyclin-like F-box domain containing protein 9e-2 At1g74080 MYB122 (MYB DOMAIN PROTEIN 122) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Arabidopsis thaliana At5g55940 835692 emb2731 (embryo defective 2731) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endoplasmic reticulum;MOPF - - - C.G. S.X.
0.02 4e-2 40 Glycine max PsAffx.CL705Contig1_at PsAffx.CL705Contig1 - - 5e-1 At1g16810 unknown protein C.G. S.X.
0.02 9e-1 34 Hordeum vulgare Contig26557_at Contig26557 - - 8e-1 At5g60490 FLA12 C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.214021.1.S1_at pmrna27307 hypothetical protein - 2e-1 At2g40085 unknown protein C.G. S.X.
0.03 5e-1 36 Triticum aestivum Ta.8984.3.S1_at CA657986 - - 9e-1 At3g52720 ACA1 (ALPHA CARBONIC ANHYDRASE 1) C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1622267_at CF516149 hypothetical protein LOC100250166 - 7e-2 At1g09500 cinnamyl-alcohol dehydrogenase family / CAD family C.G. S.X.
0.02 2e-1 36 Zea mays Zm.16989.1.S1_at CK849999 - - 8e-2 At4g28480 DNAJ heat shock family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage