CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0167800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.74 91.4 Os10g0167800 NM_195037.1 - - 6e-1 At2g14835 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.52 69.6 Os01g0873400 9629.m06474 - - 3e-1 At3g27890 NQR (NADPH:QUINONE OXIDOREDUCTASE) S.X. H.G.
0.50 68.0 Os04g0406100 9640.m03477 - - 4e+0 At5g62950 catalytic/ nucleotide binding S.X. H.G.
0.50 68.0 Os06g0623400 9634.m04036 - - 2e+0 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) S.X. H.G.
0.48 63.7 Os01g0255500 NM_187903.1 - - 1e+0 At5g56880 unknown protein S.X. H.G.
0.44 58.1 Os03g0236400 NM_184716.1 - - 1e-1 At3g58510 DEAD box RNA helicase, putative (RH11) S.X. H.G.
0.43 55.4 Os11g0529600 9639.m03181 - - 3e+0 At2g13126 unknown protein S.X. H.G.
0.40 51.1 Os04g0591700 9632.m04881 - - 7e+0 At5g59845 gibberellin-regulated family protein S.X. H.G.
0.36 44.0 Os03g0326550 9631.m02095 - - 2e+0 At4g26965 NADH:ubiquinone oxidoreductase family protein S.X. H.G.
0.35 41.7 Os10g0405200 9638.m02264 - - 5e+0 At5g44610 MAP18 (Microtubule-associated Protein 18) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
48.5 99.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.7 99.8 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.3 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 2432 Os10g0168600 NM_195037.1 - - 6e-1 At2g14835 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.23 3e-13 77 Os03g0147300 9631.m00458 - - 2e+0 At3g02370 unknown protein C.G. S.X.
0.14 9e-17 89 Os05g0299600 AK100896.1 - Conserved hypothetical protein 2e-2 At3g09480 histone H2B, putative C.G. S.X.
0.11 3e-13 77 Os04g0677000 AK122185.1 - Conserved hypothetical protein 3e+0 At4g16240 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At2g14835 815972 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:endomembrane system;MPO - - - C.G. S.X.
0.02 1e-2 42 Glycine max Gma.2206.1.S1_at BG650498 - - 5e-12 At5g58490 cinnamoyl-CoA reductase family C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HVSMEn0022J09r2_at HVSMEn0022J09r2 - - 2e-1 At3g55070 - C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.221733.1.S1_s_at pmrna38769 hypothetical protein - 8e-5 At1g32730 unknown protein C.G. S.X.
0.06 4e-2 40 Triticum aestivum Ta.25662.1.A1_at CD373762 - - 5e+0 At3g48840 nucleic acid binding / nucleotide binding C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1610434_at CF404432 hypothetical protein LOC100244562 - 1e+0 At5g24090 acidic endochitinase (CHIB1) C.G. S.X.
0.02 7e-2 38 Zea mays ZmAffx.820.1.A1_at AI770463 Hypothetical protein LOC100217195 - 8e-1 At5g23950 C2 domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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