CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0159800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os10g0159800 AK060781.1 - Zinc-containing alcohol dehydrogenase superfamilyprotein 8e-7 At1g64710 alcohol dehydrogenase, putative S.X. H.G.
0.36 44.0 Os03g0626600 AK066665.1 - The start codon is not identified. 8e-14 At4g36860 zinc ion binding S.X. H.G.
0.18 13.7 Os02g0235900 9630.m01307 - FAD linked oxidase, N-terminal domain containingprotein 2e-1 At1g30740 FAD-binding domain-containing protein S.X. H.G.
0.12 7.2 Os06g0103800 AK067892.1 - Protein of unknown function DUF125 family protein 1e-3 At5g65200 PUB38 (PLANT U-BOX 38) S.X. H.G.
0.09 4.9 Os02g0273700 AK102828.1 - VHS domain containing protein 2e-8 At4g32760 protein transporter S.X. H.G.
0.06 3.0 Os07g0578200 AK070952.1 - Conserved hypothetical protein 1e-12 At2g44280 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.1 98.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.1 97.4 GSM195226 Root GSE7951 Genome-wide gene expression profiling of rice stigma
7.0 97.4 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
6.5 97.2 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
5.8 97.0 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.1 96.6 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.1 96.6 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.0 96.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-14 81 Os11g0210300 AK073964.1 - Alcohol dehydrogenase 1 2e-30 At1g77120 ADH1 (ALCOHOL DEHYDROGENASE 1) C.G. S.X.
0.07 3e-8 61 Os07g0621800 AK071704.1 - Zinc-containing alcohol dehydrogenase superfamilyprotein 7e-1 At5g43940 HOT5 (sensitive to hot temperatures 5) C.G. S.X.
0.06 4e-12 73 Os12g0138100 AK105237.1 - GRAS transcription factor domain containingprotein 1e-12 At1g77120 ADH1 (ALCOHOL DEHYDROGENASE 1) C.G. S.X.
0.05 4e-12 73 Os02g0637700 AK073849.1 - Zinc-containing alcohol dehydrogenase superfamilyprotein 6e-11 At5g24760 alcohol dehydrogenase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 5e-7 56 Arabidopsis thaliana At1g64710 842779 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV - - - C.G. S.X.
0.07 5e-5 50 Glycine max GmaAffx.92406.1.S1_s_at CF808131 - - 2e-31 At1g77120 ADH1 (ALCOHOL DEHYDROGENASE 1) C.G. S.X.
0.44 6e-76 284 Hordeum vulgare Contig10034_at Contig10034 - - 2e-4 At1g32780 alcohol dehydrogenase, putative C.G. S.X.
0.09 2e-4 48 Populus trichocarpa PtpAffx.224208.1.S1_at pmrna42537 hypothetical protein - 6e-7 At1g32780 alcohol dehydrogenase, putative C.G. S.X.
0.41 6e-53 208 Triticum aestivum Ta.10015.2.S1_at CD872946 - - 8e-1 At1g64710 alcohol dehydrogenase, putative C.G. S.X.
0.04 4e-5 48 Vitis vinifera 1616500_at AF194175.1 alcohol dehydrogenase 3 - 7e-26 At1g77120 ADH1 (ALCOHOL DEHYDROGENASE 1) C.G. S.X.
0.12 8e-29 127 Zea mays Zm.18451.1.A1_at CO532342 hypothetical protein LOC100272357 - 1e-5 At1g64710 alcohol dehydrogenase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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