CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0153800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0153800 NM_194912.1 - - 2e-1 At2g02440 unknown protein S.X. H.G.
0.83 95.8 Os01g0889101 NM_190210.1 - - 1e-3 At3g17160 unknown protein S.X. H.G.
0.73 91.1 Os06g0148100 9634.m00477 - - 1e+0 At4g33660 unknown protein S.X. H.G.
0.67 87.2 Os02g0207100 AK119766.1 - BCH1 1e+0 At2g11005 glycine-rich protein S.X. H.G.
0.67 87.2 Os11g0643200 9639.m03905 - - 1e+1 At5g54000 oxidoreductase, 2OG-Fe(II) oxygenase family protein S.X. H.G.
0.40 51.1 Os11g0215200 9639.m01036 - - 5e-2 At4g19270 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
42.9 99.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.9 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.7 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-5 50 Os06g0654900 CB684051 - CONSTANS-like protein CO6 7e-1 At2g24790 COL3 (CONSTANS-LIKE 3) C.G. S.X.
0.05 5e-10 65 Os02g0178100 AK109630.1 - CONSTANS-like protein CO6 2e-4 At5g50830 unknown protein C.G. S.X.
0.05 7e-3 42 Os04g0497700 AK121024.1 - CONSTANS-like protein 2e-1 At2g24790 COL3 (CONSTANS-LIKE 3) C.G. S.X.
0.03 1e-1 38 Os04g0377100 9632.m02925 - - 5e-1 At4g14540 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) C.G. S.X.
0.02 7e-3 42 Os03g0416300 AK058400.1 - COBRA-like protein 2 precursor 7e-8 At5g60920 COB (COBRA) C.G. S.X.
0.02 1e-1 38 Os10g0111300 CB638003 - TGF-beta receptor, type I/II extracellular regionfamily protein 1e-3 At1g69860 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-1 36 Arabidopsis thaliana At2g02440 814774 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.05 3e-1 36 Glycine max GmaAffx.92718.1.S1_s_at CF808443 - - 7e-3 At5g03350 legume lectin family protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig15733_at Contig15733 - - 6e-2 At1g23010 LPR1 (Low Phosphate Root1) C.G. S.X.
0.05 8e-2 38 Populus trichocarpa PtpAffx.3389.1.S1_at DN502766 - - 2e-4 At2g35230 VQ motif-containing protein C.G. S.X.
0.07 2e-4 46 Triticum aestivum Ta.1672.1.S1_x_at BQ619780 - - 3e-6 At2g24790 COL3 (CONSTANS-LIKE 3) C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1617526_s_at CB972978 hypothetical protein LOC100250396 - 8e-1 At2g10920 unknown protein C.G. S.X.
0.03 9e-2 36 Zea mays Zm.7777.1.A1_at BM079863 F-box domain containing protein - 5e+0 At5g60964 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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