Gene omics information

Query gene ID	Os10g0148400
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.2	Os10g0148400	CB679458	-	TGF-beta receptor, type I/II extracellular regionfamily protein	2e-1	At5g03710	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.33	38.8	Os04g0623200	AK105231.1	-	Conserved hypothetical protein	4e-1	At4g29230	anac075 (Arabidopsis NAC domain containing protein 75)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.32	36.3	Os08g0375400	AK108186.1	-	Plant disease resistance response protein familyprotein	6e+0	At5g61030	GR-RBP3 (glycine-rich RNA-binding protein 3)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	31.1	Os06g0289900	CR280016	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	8e-1	At2g37950	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	31.1	Os11g0635500	AK067543.1	-	Cytochrome P450 family protein	4e-3	At5g06380	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.24	22.4	Os04g0101400	AK100972.1	-	Cytochrome P450 family protein	1e-2	At5g06900	CYP93D1	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.18	13.7	Os01g0126200	AK121464.1	-	Spore coat protein-like protein	7e-2	At1g71040	LPR2 (Low Phosphate Root2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.17	12.6	Os02g0589400	9630.m03609	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	1e-2	At5g47080	CKB1	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	11.3	Os07g0414000	AK060507.1	-	Transferase family protein	3e+0	At4g22513	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.15	10.3	Os10g0539700	AK120628.1	-	Conserved hypothetical protein	1e+0	At2g11890	adenylate cyclase	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
36.5	99.8	GSM422674	Musa_DNA_RICE	GSE16865	Heterologous microarrays for the study of drought stress in Musa
31.2	99.7	GSM421698	XOO, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
23.8	99.4	GSM421725	MOCK, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.2	99.0	GSM421717	MOCK, 8 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.3	98.7	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.2	98.5	GSM421705	XOO, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.7	98.4	GSM421675	XOC, 8 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.5	98.3	GSM421685	XOC, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.0	98.2	GSM421718	MOCK, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.2	97.7	GSM174884	E mock 4 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	8e-77	289	Os01g0872100	AK099405.1	-	TGF-beta receptor, type I/II extracellular regionfamily protein	1e-2	At2g17420	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	2e-105	385	Os01g0872000	AK102239.1	-	TGF-beta receptor, type I/II extracellular regionfamily protein	2e-2	At2g17420	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.41	4e-57	224	Os01g0872300	NM_190808.1	-	Conserved hypothetical protein	4e+0	At3g06780	glycine-rich protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.20	6e-65	250	Os02g0757400	9630.m05123	-	-	7e+0	At4g37200	HCF164	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.20	2e-59	232	Os09g0330400	9630.m03023	-	-	6e-1	At1g54140	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	3e-33	145	Os08g0186825	9636.m00827	-	-	8e+0	At4g21830	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	38	Arabidopsis thaliana	At5g03710	831750	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	8e-2	40	Glycine max	Gma.13104.1.S1_at	CD396157	-	-	5e-1	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	C.G.	S.X.	Please select
0.15	9e-15	81	Hordeum vulgare	Contig7895_at	Contig7895	-	-	2e+0	At4g08406	unknown protein	C.G.	S.X.	Please select
0.01	8e-2	40	Populus trichocarpa	PtpAffx.220497.1.S1_at	pmrna36890	hypothetical protein	-	4e-1	At5g20900	JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.24	2e-20	101	Triticum aestivum	Ta.19549.1.S1_at	CA653310	-	-	1e+0	At5g27541		C.G.	S.X.	Please select
0.02	7e-2	38	Vitis vinifera	1622507_at	CB975105	-	-	6e-20	At1g51410	cinnamyl-alcohol dehydrogenase, putative (CAD)	C.G.	S.X.	Please select
0.10	4e-7	56	Zea mays	Zm.5661.1.A1_at	AY107527.1	-	-	1e+0	At2g33585	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
C	GO:0006857	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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