CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0140700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.7 Os10g0140700 CB620435 - Conserved hypothetical protein 3e+0 At5g49600 unknown protein S.X. H.G.
0.47 62.3 Os03g0598100 AK071010.1 - Amino acid-binding ACT domain containing protein 2e-5 At1g69040 ACR4 (ACT REPEAT 4) S.X. H.G.
0.44 58.1 Os01g0804400 AK070931.1 - Cytochrome P450 family protein 2e-1 At1g34540 CYP94D1 S.X. H.G.
0.44 58.1 Os02g0693500 AK103651.1 - Conserved hypothetical protein 6e-1 At4g17790 - S.X. H.G.
0.41 52.4 Os08g0416800 AK062915.1 - Conserved hypothetical protein 3e-1 At3g52561 unknown protein S.X. H.G.
0.39 48.3 Os02g0644900 AK066709.1 - Sodium/potassium/calcium exchanger 4 precursor(Na(+)/K(+)/Ca(2+)- exchange protein 4). Splice isoform 2 1e-12 At2g47600 ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER) S.X. H.G.
0.39 48.3 Os11g0660000 AK066709.1 - Sodium/calcium exchanger membrane region domaincontaining protein 1e-12 At2g47600 ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER) S.X. H.G.
0.38 46.9 Os06g0680500 AK099745.1 - Glutamate receptor 3.1 precursor (Ligand-gated ionchannel 3.1) (AtGLR2) 7e-6 At1g05200 ATGLR3.4 S.X. H.G.
0.37 45.0 Os05g0510100 BI810491 - Protein of unknown function DUF567 family protein 2e-1 At5g52360 ADF10 (ACTIN DEPOLYMERIZING FACTOR 10) S.X. H.G.
0.33 38.8 Os02g0680700 CR281424 - Myb, DNA-binding domain containing protein 8e+0 Atmg00300 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.7 98.6 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
13.2 98.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.2 98.0 GSM281584 Rice Zhonghua11, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
9.7 98.0 GSM281586 Rice mutant dst, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
9.7 98.0 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.5 97.9 GSM359903 FL478 root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.1 97.9 GSM421705 XOO, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.0 97.8 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
8.5 97.7 GSM421685 XOC, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.3 97.7 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 2e-27 125 Os03g0242300 AK065146.1 - Hypothetical protein 9e-1 At1g21460 nodulin MtN3 family protein C.G. S.X.
0.03 2e-5 52 Os09g0493000 AK107737.1 - Conserved hypothetical protein 2e+0 At3g44950 glycine-rich protein C.G. S.X.
0.02 9e-5 50 Os01g0202500 BM418675 - Zn-finger, CONSTANS type domain containing protein 8e-4 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 3e-4 48 Os05g0484200 9633.m03792 - - 6e-1 At2g46940 unknown protein C.G. S.X.
0.01 6e-6 54 Os12g0281600 AK072326.1 - Disease resistance protein family protein 2e+0 At3g58470 methyltransferase/ nucleic acid binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At5g49600 835022 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 6e-2 40 Glycine max GmaAffx.75507.1.A1_at BE822138 - - 2e-10 At5g23100 unknown protein C.G. S.X.
0.03 1e-3 44 Hordeum vulgare Contig19894_at Contig19894 - - 9e-1 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.03 9e-1 36 Populus trichocarpa PtpAffx.205750.1.S1_at pmrna11351 hypothetical protein - 2e+0 At1g29465 unknown protein C.G. S.X.
0.17 2e-44 180 Triticum aestivum Ta.27834.1.S1_x_at BQ160730 - - 2e+0 At1g06960 small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1610324_a_at CB346041 hypothetical protein LOC100254667 - 8e-4 At5g42100 ATBG_PAP C.G. S.X.
0.03 5e-3 42 Zea mays Zm.18951.1.A1_at CO533345 hypothetical protein LOC100272652 - 5e+0 At5g47080 CKB1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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