CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0133400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os10g0133400 9638.m00349 - - 8e+0 At2g15830 unknown protein S.X. H.G.
0.43 55.4 Os01g0845400 9629.m06194 - - 2e+0 At2g17442 unknown protein S.X. H.G.
0.43 55.4 Os03g0642600 9631.m04253 - - 5e-3 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) S.X. H.G.
0.42 53.9 Os01g0675400 9629.m04661 - - 6e-1 At5g59060 unknown protein S.X. H.G.
0.40 51.1 Os04g0516800 AK105554.1 - Conserved hypothetical protein 2e-1 At5g02570 histone H2B, putative S.X. H.G.
0.32 36.3 Os08g0250400 9636.m01523 - - 3e-1 At2g32130 - S.X. H.G.
0.30 32.7 Os07g0414700 NM_188168.1 - Protein of unknown function DUF707 family protein 1e-1 At5g18920 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.9 99.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
40.7 99.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.8 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.1 99.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.6 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 2e-171 603 Os10g0133500 AK066866.1 - Transferase family protein 4e-3 At4g36780 transcription regulator C.G. S.X.
0.06 4e-6 54 Os10g0195600 AK100207.1 - Transferase family protein 4e+0 At2g42380 bZIP transcription factor family protein C.G. S.X.
0.03 2e-8 61 Os10g0106300 9638.m00073 - - 1e+1 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.03 2e-8 61 Os10g0106750 NM_194527.1 - - 1e+1 At5g24105 AGP41 (ARABINOGALACTAN-PROTEIN 41) C.G. S.X.
0.03 2e-5 52 Os04g0175500 9632.m00828 - Transferase family protein 3e+0 At2g27180 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e+0 32 Arabidopsis thaliana At2g15830 816079 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 7e-1 36 Glycine max PsAffx.psMC005xC11f_s_at PsAffx.psMC005xC11f - - 9e+0 At2g17450 RHA3A C.G. S.X.
0.03 6e-2 38 Hordeum vulgare Contig9691_at Contig9691 - - 6e-3 At4g36830 GNS1/SUR4 membrane family protein C.G. S.X.
0.02 7e-1 36 Populus trichocarpa PtpAffx.25242.1.A1_at CV227617 - - 1e+0 At1g20100 unknown protein C.G. S.X.
0.07 9e-6 52 Triticum aestivum Ta.30590.1.A1_at CK205601 - - 2e+0 At4g15460 glycine-rich protein C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1617745_at CF372303 hypothetical protein LOC100256638 - 5e+0 At5g44710 - C.G. S.X.
0.02 9e-1 34 Zea mays Zm.17296.1.A1_at CK347857 hypothetical protein LOC100273650 - 3e+1 At5g20740 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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