CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0131800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os10g0131800 NM_194728.1 - Conserved hypothetical protein 2e+0 At3g53370 DNA-binding S1FA family protein S.X. H.G.
0.62 81.5 Os01g0679400 AK107970.1 - Hypothetical protein 1e+0 At1g21940 unknown protein S.X. H.G.
0.60 79.7 Os01g0910350 9629.m06774 - - 3e+0 At2g27410 unknown protein S.X. H.G.
0.57 77.0 Os01g0854200 NM_190657.1 - - 5e-1 At1g68140 - S.X. H.G.
0.57 77.0 Os07g0183700 9635.m00812 - - 8e+0 At3g28950 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related S.X. H.G.
0.57 77.0 Os04g0318700 9638.m00476 - - 1e+0 At1g02405 proline-rich family protein S.X. H.G.
0.51 68.7 Os03g0693500 9631.m04743 - - 1e+1 At3g12470 nucleic acid binding S.X. H.G.
0.50 68.0 Os11g0240500 9639.m01257 - - 4e+0 At5g12880 proline-rich family protein S.X. H.G.
0.49 64.4 Os04g0226700 9632.m01388 - - 1e+0 At5g13510 ribosomal protein L10 family protein S.X. H.G.
0.48 63.7 Os05g0506400 9633.m04001 - Hypothetical protein 4e+0 At5g55750 hydroxyproline-rich glycoprotein family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.0 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.7 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.1 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.0 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 1e-43 178 Os11g0689100 AK108692.1 - Disease resistance protein family protein 2e+0 At4g22400 unknown protein C.G. S.X.
0.14 5e-21 103 Os11g0480000 AK064142.1 - Disease resistance protein family protein 6e+0 At5g42770 - C.G. S.X.
0.10 2e-17 93 Os07g0238400 NM_186745.1 - - 4e+0 Atmg00740 - C.G. S.X.
0.09 6e-20 101 Os03g0445300 NM_195895.1 - - 2e-1 At4g13940 MEE58 (MATERNAL EFFECT EMBRYO ARREST 58) C.G. S.X.
0.07 3e-4 48 Os11g0687900 AK103659.1 - Hypothetical protein 1e+0 At5g22390 unknown protein C.G. S.X.
0.06 2e-19 99 Os02g0499400 9630.m02827 - - 1e-1 At1g02190 CER1 protein, putative C.G. S.X.
0.04 5e-12 73 Os11g0606900 9639.m03588 - Disease resistance protein family protein 2e+0 At2g42310 unknown protein C.G. S.X.
0.02 7e-11 69 Os11g0606500 AK065351.1 - Disease resistance protein family protein 2e+0 At4g37730 AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7) C.G. S.X.
0.02 3e-4 48 Os11g0605900 CB664533 - Hypothetical protein 2e+0 At3g47710 bHLH family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Arabidopsis thaliana At3g53370 824505 DNA-binding S1FA family protein F:DNA binding;P:regulation of transcription;C:nucleus;P - - - C.G. S.X.
0.01 5e-1 38 Glycine max PsAffx.C12000049_at PsAffx.C12000049 - - 5e+0 At1g61165 unknown protein C.G. S.X.
0.01 7e-1 36 Hordeum vulgare Contig21644_at Contig21644 - - 8e-1 At1g06980 unknown protein C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.140020.1.A1_at CV275853 - - 7e+0 At4g11290 peroxidase, putative C.G. S.X.
0.01 4e-1 38 Triticum aestivum TaAffx.55939.1.S1_at CA659262 - - 2e+1 At3g46310 unknown protein C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1607479_at CB981260 - - 5e-2 At3g26180 CYP71B20 C.G. S.X.
0.01 2e-1 38 Zea mays Zm.6882.2.A1_at BG837779 hypothetical protein LOC100191938 - 4e-2 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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