CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0124600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0124600 9638.m00268 - - 4e-1 At1g43900 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.83 95.8 Os11g0649100 9639.m03961 - - 2e+0 At4g12760 unknown protein S.X. H.G.
0.71 89.6 Os08g0141200 9636.m00386 - - 9e-1 At5g38300 unknown protein S.X. H.G.
0.67 87.2 Os10g0334800 9638.m01577 - - 3e+1 At5g35230 unknown protein S.X. H.G.
0.59 78.0 Os07g0567500 NM_186364.1 - Conserved hypothetical protein 2e+0 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.50 68.0 Os09g0349800 9637.m01547 - Protein kinase domain containing protein 1e+0 At5g66710 protein kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
363.9 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
56.6 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.0 84.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.8 81.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.7 79.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
0.6 77.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.6 77.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.5 75.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 9e-16 85 Os03g0837700 9631.m06138 - Heat shock protein DnaJ, N-terminal domaincontaining protein 4e-4 At2g17420 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) C.G. S.X.
0.06 5e-8 59 Os03g0837500 9631.m06136 - - 4e-1 At3g44950 glycine-rich protein C.G. S.X.
0.05 3e-9 63 Os03g0837600 9631.m06137 - - 2e-3 At1g03680 ATHM1 C.G. S.X.
0.03 5e-2 40 Os09g0452550 9637.m02462 - - 2e+0 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 1e-2 42 Os09g0485600 AK063705.1 - The start codon is not identified. 5e-3 At1g08290 zinc finger (C2H2 type) protein (WIP3) C.G. S.X.
0.01 3e-3 44 Os02g0704000 AK064824.1 - Zeaxanthin cleavage oxygenase 4e+0 At4g19170 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 36 Arabidopsis thaliana At1g43900 840989 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOBFVA - - - C.G. S.X.
0.03 1e-1 38 Glycine max PsAffx.C263000005_at PsAffx.C263000005 - - 3e+0 At2g02060 transcription factor C.G. S.X.
0.03 5e-2 38 Hordeum vulgare EBro08_SQ012_G23_at EBro08_SQ012_G23 - - 2e-1 At5g23950 C2 domain-containing protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.222431.1.S1_at pmrna39828 hypothetical protein - 9e+0 At5g05640 nucleoprotein-related C.G. S.X.
0.04 4e-1 36 Triticum aestivum TaAffx.28187.1.S1_at CA663953 - - 8e-2 At5g25220 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) C.G. S.X.
0.03 7e+0 30 Vitis vinifera 1622857_at CB001399 - - 5e-2 At4g17040 ATP-dependent Clp protease proteolytic subunit, putative C.G. S.X.
0.03 3e-3 42 Zea mays Zm.17350.1.A1_at CO524170 - - 2e+1 Atcg00300 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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