CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0117200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os10g0117200 9638.m00184 - - 5e+0 At5g51451 unknown protein S.X. H.G.
0.47 62.3 Os06g0561100 CB622963 - - 8e-1 At3g44380 - S.X. H.G.
0.35 41.7 Os11g0291000 9639.m01728 - Beta-D-xylosidase 2e-2 At1g07730 - S.X. H.G.
0.27 27.5 Os01g0363600 NM_194015.1 - Hydroxyethylthiazole kinase, monofunctional familyprotein 7e+0 At5g02120 OHP (ONE HELIX PROTEIN) S.X. H.G.
0.07 3.7 Os02g0738300 AK108113.1 - Conserved hypothetical protein 1e-1 At4g14695 unknown protein S.X. H.G.
0.03 1.4 Os03g0636200 9631.m04195 - - 2e+0 At1g29060 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
34.8 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.6 99.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.3 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.5 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.3 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 1e-33 145 Os02g0618600 9630.m03917 - - 4e+0 At4g07526 unknown protein C.G. S.X.
0.16 2e-44 180 Os01g0200900 NM_188288.1 - - 8e-1 At4g31580 SRZ-22 C.G. S.X.
0.15 2e-44 180 Os03g0349600 AK058397.1 - - 4e+0 At5g52490 fibrillarin, putative C.G. S.X.
0.15 2e-35 151 Os04g0607400 AK066668.1 - Conserved hypothetical protein 4e+0 At3g53000 AtPP2-A15 (Phloem protein 2-A15) C.G. S.X.
0.13 3e-21 103 Os08g0362600 9636.m02717 - - 1e-4 At1g22410 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative C.G. S.X.
0.11 4e-42 173 Os12g0409800 AK067209.1 - Conserved hypothetical protein 5e+0 At4g37700 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At5g51451 6241076 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system - - - C.G. S.X.
0.04 1e-1 38 Glycine max GmaAffx.85506.1.A1_at BE584060 - - 3e+0 At3g62730 unknown protein C.G. S.X.
0.02 7e-1 34 Hordeum vulgare Contig25831_at Contig25831 - - 3e-1 At2g44290 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3) C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.29374.1.A1_at BP930524 - - 3e+0 At3g06840 unknown protein C.G. S.X.
0.05 4e-1 36 Triticum aestivum TaAffx.5261.1.S1_at CA717176 - - 1e+1 At4g37830 cytochrome c oxidase-related C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1617361_at CF404356 hypothetical protein LOC100244017 - 3e-50 At4g35630 PSAT C.G. S.X.
0.03 4e-2 38 Zea mays Zm.2377.1.S1_at AY104113.1 hypothetical protein LOC100191708 - 3e+1 Atmg01260 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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