Gene omics information

Query gene ID Os10g0108700
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5777.0Os10g0108700AK060060.1-Transferase family protein1e+1At5g50460protein transport protein SEC61 gamma subunit, putativeS.X.H.G.
0.4355.4Os09g0125900AK065634.1-ATP-binding cassette, sub-family G, member 1(White protein homolog) (ATP-binding cassette transporter8). Splice isoform 36e-2At1g51500CER5 (ECERIFERUM 5)S.X.H.G.
0.3846.9Os03g03821009631.m02606-Naringenin-chalcone synthase family protein7e-1At2g28630KCS12 (3-KETOACYL-COA SYNTHASE 12)S.X.H.G.
0.3032.7Os04g0401100AK061279.1-Conserved hypothetical protein2e+0At5g62950catalytic/ nucleotide bindingS.X.H.G.
0.2931.1Os01g0842400AK068901.1-Laccase (EC 1.10.3.2)7e-5At2g38080IRX12 (IRREGULAR XYLEM 12)S.X.H.G.
0.2727.5Os09g0445500AK120514.1-Zn-finger, C2H2 type domain containing protein7e-1At2g44080ARL (ARGOS-LIKE)S.X.H.G.
0.2625.6Os09g0373200AK109686.1-Strictosidine synthase family protein2e-1At5g20540ATBRXL4 (BREVIS RADIX-LIKE 4)S.X.H.G.
0.2524.1Os04g0353600CB641510-Male sterility protein family protein2e+0At1g35333unknown proteinS.X.H.G.
0.2524.1Os11g0641800AK066963.1-Multicopper oxidase, type 1 domain containingprotein3e-1At2g38080IRX12 (IRREGULAR XYLEM 12)S.X.H.G.
0.2321.2Os06g0314600AK067321.1-Floral nectary-specific protein2e-1At1g15125S-adenosylmethionine-dependent methyltransferase/ methyltransferaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.899.2GSM431936Shoot- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
19.599.1GSM431935Shoot- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.997.6GSM431940Shoot- -Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.897.6GSM421709MOCK, 2 hai - rep3GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.997.3GSM421669XOC, 2 hai - rep3GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.797.3GSM421684XOC, 96 hai - rep2GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.797.3GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.697.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.697.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.597.2GSM431939Shoot- -Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.611e-68262Os10g01074009638.m00084--2e+0At5g23040CDF1 (CELL GROWTH DEFECT FACTOR 1)C.G.S.X.
0.298e-21103Os10g0122500NM_194664.1-Transferase family protein6e-1At1g71120GLIP6C.G.S.X.
0.093e-861Os04g0172400AK064755.1-Transferase family protein2e-1At2g38480integral membrane protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+132Arabidopsis thalianaAt5g50460835114protein transport protein SEC61 gamma subunit, putativeF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPA---C.G.S.X.
0.021e+036Glycine maxPsAffx.psMY011iF07r_atPsAffx.psMY011iF07r--8e+0At5g49560unknown proteinC.G.S.X.
0.061e-757Hordeum vulgareHV_CEb0016H05f2_atHV_CEb0016H05f2--4e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.222997.1.S1_atpmrna40765--2e-102Atmg00060-C.G.S.X.
0.028e-136Triticum aestivumTaAffx.109765.2.S1_atCA669372--4e-3At3g17100transcription factorC.G.S.X.
0.021e+130Vitis vinifera1617697_atCD714002--1e-25At4g27800protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1)C.G.S.X.
0.022e-240Zea maysZm.18284.1.A1_atBG873939hypothetical protein LOC100191290-5e+0At5g11830-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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