CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0106750

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os10g0106750 NM_194527.1 - - 1e+1 At5g24105 AGP41 (ARABINOGALACTAN-PROTEIN 41) S.X. H.G.
0.64 83.4 Os11g0308900 9639.m01910 - - 1e+1 At5g60670 60S ribosomal protein L12 (RPL12C) S.X. H.G.
0.46 60.9 Os07g0141801 9635.m00420 - - 6e+0 At5g40500 unknown protein S.X. H.G.
0.44 58.1 Os09g0113200 9637.m00099 - - 3e+0 At3g20390 endoribonuclease L-PSP family protein S.X. H.G.
0.44 58.1 Os02g0304600 9630.m01926 - - 7e-2 At5g53960 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) S.X. H.G.
0.44 58.1 Os06g0620200 9634.m04004 - Curculin-like (mannose-binding) lectin domaincontaining protein 5e-3 At4g04510 protein kinase family protein S.X. H.G.
0.40 51.1 Os07g0204000 9635.m01008 - - 1e-16 At5g19790 RAP2.11 (related to AP2 11) S.X. H.G.
0.40 51.1 Os02g0497100 9630.m02809 - - 4e-1 At3g26800 unknown protein S.X. H.G.
0.39 48.3 Os03g0836250 9631.m06122 - - 2e-1 At5g48657 defense protein-related S.X. H.G.
0.35 41.7 Os02g0688900 9630.m04503 - GPI transamidase subunit PIG-U family protein 4e-9 At1g12730 cell division cycle protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.8 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.0 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.83 0 876 Os10g0106300 9638.m00073 - - 1e+1 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.39 5e-130 466 Os10g0106500 9638.m00074 - - 6e+0 At5g07080 transferase family protein C.G. S.X.
0.08 1e-7 59 Os10g0133500 AK066866.1 - Transferase family protein 4e-3 At4g36780 transcription regulator C.G. S.X.
0.03 3e-8 61 Os10g0133400 9638.m00349 - - 8e+0 At2g15830 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 32 Arabidopsis thaliana At5g24105 2745995 AGP41 (ARABINOGALACTAN-PROTEIN 41) Encodes a putative arabinogalactan-protein (AGP41). - - - C.G. S.X.
0.02 7e-2 40 Glycine max HgAffx.16448.1.S1_at CB279909 - - 4e+0 At2g37410 ATTIM17-2 C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig15506_at Contig15506 - - 6e+0 At3g28420 unknown protein C.G. S.X.
0.03 1e-3 46 Populus trichocarpa PtpAffx.133018.1.S1_s_at CX178502 hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein - 4e-22 At5g41040 transferase family protein C.G. S.X.
0.02 5e-2 40 Triticum aestivum TaAffx.31436.1.S1_at CA616455 - - 1e-3 At5g05340 peroxidase, putative C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1606852_at CF415037 - - 3e-5 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
0.02 9e-2 38 Zea mays Zm.2263.1.A1_at AW330859 - - 7e-5 At2g43050 ATPMEPCRD C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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