CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0106500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0106500 9638.m00074 - - 6e+0 At5g07080 transferase family protein S.X. H.G.
0.32 36.3 Os01g0169100 9629.m00677 - - 1e-4 At3g27810 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) S.X. H.G.
0.23 21.2 Os12g0623300 9640.m04210 - - 1e+0 At5g16110 unknown protein S.X. H.G.
0.21 17.9 Os01g0207100 NM_188351.1 - - 2e-11 At3g14920 unknown protein S.X. H.G.
0.14 9.3 Os12g0183500 9640.m00766 - - 3e+0 At4g22820 zinc finger (AN1-like) family protein S.X. H.G.
0.07 3.7 Os03g0353800 9631.m02305 - - 2e+0 At5g46300 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.6 99.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.3 99.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.6 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.2 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.1 99.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.8 99.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.3 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.0 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 2e-130 466 Os10g0106750 NM_194527.1 - - 1e+1 At5g24105 AGP41 (ARABINOGALACTAN-PROTEIN 41) C.G. S.X.
0.39 2e-109 397 Os10g0106300 9638.m00073 - - 1e+1 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e+0 32 Arabidopsis thaliana At5g07080 830599 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO - - - C.G. S.X.
0.03 8e-3 42 Glycine max PsAffx.CL2116Contig1_at PsAffx.CL2116Contig1 - - 2e-2 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) C.G. S.X.
0.03 7e-1 34 Hordeum vulgare Contig19489_at Contig19489 - - 1e+0 At3g23171 unknown protein C.G. S.X.
0.02 8e+0 32 Populus trichocarpa PtpAffx.89130.1.A1_at CV270804 hypothetical protein - 3e-1 At5g23290 PDF5 (PREFOLDIN 5) C.G. S.X.
0.03 4e-1 36 Triticum aestivum TaAffx.54199.1.S1_at CA684541 - - 2e-2 At5g59950 RNA and export factor-binding protein, putative C.G. S.X.
0.03 7e+0 30 Vitis vinifera 1618881_x_at CF202933.1 - - 7e+0 At5g11120 unknown protein C.G. S.X.
0.03 3e+0 32 Zea mays ZmAffx.226.1.A1_at AI670238 - - 1e+1 At5g49710 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage