Gene omics information

Query gene ID Os09g0542900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6483.4Os09g0542900AK073400.1-Conserved hypothetical protein2e+0At4g24026unknown proteinS.X.H.G.
0.7088.4Os02g0653900AK104793.1--6e-2At4g16820lipase class 3 family proteinS.X.H.G.
0.5676.3Os02g0165100AK066645.1-Protein kinase domain containing protein2e-4At2g35620FEI2 (FEI 2)S.X.H.G.
0.5573.7Os08g0448000AK120964.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment)1e-6At3g212404CL2 (4-COUMARATE:COA LIGASE 2)S.X.H.G.
0.5371.3Os02g0314600AK068924.1-Peptidase A1, pepsin family protein1e+0At5g55570unknown proteinS.X.H.G.
0.4863.7Os05g0127300AK106429.1-Cytokinin-regulated kinase 12e-2At1g78980SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)S.X.H.G.
0.4660.9Os03g0301200AK119578.1-COBRA-like protein 7 precursor2e-5At3g16860COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR)S.X.H.G.
0.4458.1Os06g0649000AK106282.1-The start codon is not identified.7e-4At1g80840WRKY40S.X.H.G.
0.4253.9Os01g0667600AK111561.1-Ras-related protein Rab11B1e-20At1g28550AtRABA1i (Arabidopsis Rab GTPase homolog A1i)S.X.H.G.
0.4253.9Os03g0285800AF332873.1-MAP kinase 1 (MAP kinase MAPK5a)8e-4At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.099.3GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
21.599.2GSM375649Taichung 65_shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
19.699.1GSM154829Root_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in rice
18.499.0GSM154831Root_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
18.098.9GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
17.498.9GSM375647Taichung 65_shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
17.398.9GSM375648Taichung 65_shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
16.898.8GSM159204Inflorescence (P6, 22 - 30 cm), biological rep 1GSE6893Expression data for reproductive development in rice
15.798.7GSM154832Root_DMSO-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in rice
14.598.6GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-859Os11g0153300AK060118.1-Hypothetical protein8e+0At3g03280unknown proteinC.G.S.X.
0.034e-344Os03g0648400AY224432.1-DnaJ protein homolog ANJ11e-29At5g22060ATJ2C.G.S.X.
0.021e-346Os04g0395800AK107750.1-ZIM domain containing protein2e-3At5g11930glutaredoxin family proteinC.G.S.X.
0.024e-344Os02g05332009630.m03134-SOUL heme-binding protein family protein1e-1At5g65495unknown proteinC.G.S.X.
0.024e-344Os06g0179000AK065263.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-1At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)C.G.S.X.
0.022e-242Os08g02438009636.m01460--2e+0At2g36026-C.G.S.X.
0.014e-344Os11g0128400AK102291.1-CDC45-like protein family protein3e-13At3g25100CDC45 (cell division cycle 45)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt4g240266240360unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.025e-240Glycine maxPsAffx.C73000019_atPsAffx.C73000019--3e-1At4g23800high mobility group (HMG1/2) family proteinC.G.S.X.
0.047e-238Hordeum vulgareContig13240_s_atContig13240--4e-1At3g24750unknown proteinC.G.S.X.
0.035e-240Populus trichocarpaPtpAffx.206623.1.S1_atpmrna13151hypothetical protein-9e-17At2g45700sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.251e-23111Triticum aestivumTaAffx.53675.1.S1_atCK208322--4e-5At5g46730glycine-rich proteinC.G.S.X.
0.042e-136Vitis vinifera1614969_atCA810356hypothetical protein LOC100252305-3e+0At4g00390transcription regulatorC.G.S.X.
0.213e-25115Zea maysZm.13685.1.A1_atBM737193--1e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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