Gene omics information

Query gene ID Os09g0535500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5068.0Os09g0535500AK108282.1-Zn-finger, RING domain containing protein7e+0At4g35480RHA3BS.X.H.G.
0.6079.7Os11g05465009639.m03098-Galactosyl transferase family protein5e-2At4g37690galactosyl transferase GMA12/MNN10 family proteinS.X.H.G.
0.5068.0Os02g0631100AK105126.1-Conserved hypothetical protein2e+0At4g03320tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)S.X.H.G.
0.4458.1Os03g0748500AK110695.1-Flavodoxin/nitric oxide synthase domain containingprotein2e-3At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)S.X.H.G.
0.3134.5Os03g0283900AK105569.1--6e-2At1g07870protein kinase family proteinS.X.H.G.
0.1813.7Os06g0656700AK110668.1-Hypothetical protein6e+0At5g19860unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.199.9GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
54.999.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
46.699.9GSM302917endo6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
35.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
28.799.6GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
14.398.6GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
12.898.4GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
10.498.1GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
9.497.9GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
7.497.5GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigma
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-756Os10g0438800AK063228.1-Zn-finger, RING domain containing protein8e-2At1g64640plastocyanin-like domain-containing proteinC.G.S.X.
0.051e-242Os02g02493009630.m01412-Zn-finger, RING domain containing protein1e+0At2g01610invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.046e-550Os04g0243700AK059146.1-Zn-finger, RING domain containing protein8e-2At2g25409unknown proteinC.G.S.X.
0.049e-446Os01g0213200NM_188423.1--4e-1At1g47970unknown proteinC.G.S.X.
0.044e-344Os05g0478000AK111029.1-Zn-finger, RING domain containing protein3e-2At5g01880zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-552Os06g0534800AK120650.1-Ankyrin repeat containing protein3e+0At5g23100unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Arabidopsis thalianaAt4g35480829700RHA3BEncodes a putative RING-H2 finger protein RHA3b.---C.G.S.X.
0.054e-240Glycine maxGma.16021.1.S1_atBQ296209--9e-12At1g20823zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.065e-238Hordeum vulgareContig20563_atContig20563--4e-1At2g28500LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)C.G.S.X.
0.022e+034Populus trichocarpaPtpAffx.218831.1.S1_atpmrna34570hypothetical protein-5e+0At2g26520unknown proteinC.G.S.X.
0.183e-33143Triticum aestivumTaAffx.5498.1.S1_atCA708881--2e-1At2g20613unknown proteinC.G.S.X.
0.033e-238Vitis vinifera1609989_atCF415187--2e+1At4g08190Ras-related GTP-binding protein, putativeC.G.S.X.
0.042e-446Zea maysZm.2277.1.S1_atCF015271zinc finger, C3HC4 type family protein-6e+0At5g20650COPT5C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0016567The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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