CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0531200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os09g0531200 AK064107.1 - RNA recognition motif 2 domain containing protein 7e-1 At2g01080 - S.X. H.G.
0.77 93.1 Os11g0295700 9639.m01769 - - 5e+0 At4g39570 kelch repeat-containing F-box family protein S.X. H.G.
0.73 91.1 Os08g0515100 NM_188989.1 - Sulfotransferase family protein 2e-3 At3g45080 sulfotransferase family protein S.X. H.G.
0.67 87.2 Os12g0448100 9640.m02506 - - 1e+0 At4g16240 unknown protein S.X. H.G.
0.67 87.2 Os05g0225100 AK109834.1 - Conserved hypothetical protein 2e-1 At1g02065 SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8) S.X. H.G.
0.57 77.0 Os04g0422700 AK111485.1 - Conserved hypothetical protein 5e-1 At2g11005 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
253.3 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
40.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.0 99.3 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.8 98.0 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.6 97.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.6 97.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.3 97.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.0 97.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-5 52 Os01g0588400 AK107346.1 - Band 7 protein family protein 9e-3 At1g75550 glycine-rich protein C.G. S.X.
0.02 1e-4 50 Os02g0257500 9630.m01478 - - 2e-7 At5g53210 SPCH (SPEECHLESS) C.G. S.X.
0.02 1e-4 50 Os02g0540400 AK101654.1 - Conserved hypothetical protein 1e-1 At4g16240 unknown protein C.G. S.X.
0.01 2e-3 46 Os01g0289600 9629.m01807 - DNA-binding WRKY domain containing protein 3e-4 At4g01720 WRKY47 C.G. S.X.
0.01 2e-3 46 Os05g0427100 AK120642.1 - Octicosapeptide/Phox/Bem1p domain containingprotein 9e-1 At2g32840 proline-rich family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At2g01080 814636 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.64626.1.S1_at BM523464 - - 5e-2 At2g30560 glycine-rich protein C.G. S.X.
0.03 2e-2 40 Hordeum vulgare AF108009_at AF108009 - - 3e-1 At1g01453 - C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.5494.1.A1_at CV245863 - - 1e+0 At4g23240 protein kinase family protein C.G. S.X.
0.02 5e-2 40 Triticum aestivum Ta.21657.2.S1_at CA659944 - - 4e+0 At4g11845 - C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1613804_at CF514968 hypothetical protein LOC100241466 - 4e+0 At5g53690 unknown protein C.G. S.X.
0.02 8e-2 38 Zea mays ZmAffx.821.1.A1_at AI770497 - - 3e+0 At3g21840 ASK7 (ARABIDOPSIS SKP1-LIKE 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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