CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0530000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os09g0530000 AK062568.1 - Rhodanese-like domain containing protein 2e-7 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.83 95.8 Os03g0210700 AK099456.1 - Hypothetical protein 2e+0 At1g17480 IQD7 (IQ-domain 7) S.X. H.G.
0.67 87.2 Os03g0695500 CB636267 - Protein of unknown function DUF1517 family protein 1e+0 At1g54520 unknown protein S.X. H.G.
0.67 87.2 Os03g0322600 AK067222.1 - Hypothetical protein 4e-2 At5g22340 unknown protein S.X. H.G.
0.67 87.2 Os01g0501700 AB050885.1 - OsTATC protein 1e-21 At2g01110 APG2 (ALBINO AND PALE GREEN 2) S.X. H.G.
0.44 58.1 Os03g0850600 AK067191.1 - Conserved hypothetical protein 6e-1 At5g42450 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 98.2 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.9 98.1 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.7 98.1 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.3 98.1 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.8 98.0 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.2 97.9 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.6 97.8 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.8 97.6 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.5 97.5 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
7.5 97.5 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 0 1025 Os09g0529900 AK121655.1 - HpcH/HpaI aldolase family protein 2e-1 At4g10750 HpcH/HpaI aldolase family protein C.G. S.X.
0.02 5e-4 48 Os06g0715500 AK100782.1 - Translocon-associated protein, alpha subunitprecursor (TRAP-alpha) (Signal sequence receptor alphasubunit) (SSR-alpha) 1e-2 At2g21160 translocon-associated protein alpha (TRAP alpha) family protein C.G. S.X.
0.02 2e-3 46 Os07g0250900 AK107935.1 - Harpin-induced 1 domain containing protein 3e-2 At1g36940 unknown protein C.G. S.X.
0.02 7e-3 44 Os06g0678100 9634.m04517 - Hypothetical protein 1e-1 At4g13850 GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) C.G. S.X.
0.02 8e-2 40 Os08g0308800 9636.m02120 - Hypothetical protein 6e-15 At3g46630 - C.G. S.X.
0.02 1e+0 36 Os06g0474800 AK099499.1 - 4Fe-4S ferredoxin, iron-sulfur binding domaincontaining protein 5e-1 At2g20520 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6) C.G. S.X.
0.01 7e-3 44 Os02g0729200 9630.m04863 - - 4e-2 At3g42310 unknown protein C.G. S.X.
0.01 7e-3 44 Os03g0280800 AB167397.1 - UDP-glucuronic acid decarboxylase 8e-53 At2g47650 UXS4 (UDP-XYLOSE SYNTHASE 4) C.G. S.X.
0.01 1e+0 36 Os06g0691000 AK068150.1 - UMUC-like DNA-repair protein family protein 1e-1 At5g44750 REV1 C.G. S.X.
0.01 1e+0 36 Os11g0155600 AK065863.1 - ABC transporter related domain containing protein 2e-6 At3g59140 ATMRP14 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-7 57 Arabidopsis thaliana At4g27700 828884 rhodanese-like domain-containing protein F:molecular_function unknown;P:aging;C:chloroplast thylakoid membrane, chloroplast;BPOA - - - C.G. S.X.
0.23 3e-28 127 Glycine max Gma.2446.1.S1_a_at CD393550 - - 3e-27 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.48 1e-163 575 Hordeum vulgare Contig7298_at Contig7298 - - 6e-13 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.26 2e-50 200 Populus trichocarpa PtpAffx.5585.1.S1_at CV280308 hypothetical protein - 3e-24 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.46 1e-144 513 Triticum aestivum Ta.28875.1.S1_at CK212964 - - 2e-13 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.14 9e-25 113 Vitis vinifera 1609414_at CB972963 hypothetical protein LOC100245212 - 2e-5 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.51 4e-136 484 Zea mays Zm.8887.1.A1_at BM336157 rhodanese-like domain containing protein - 1e-7 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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