CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0514900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os09g0514900 AK102371.1 - Protein of unknown function DUF654 family protein 2e-2 At2g46900 - S.X. H.G.
0.73 91.1 Os01g0759700 AK101627.1 - Conserved hypothetical protein 9e-10 At1g29220 transcriptional regulator family protein S.X. H.G.
0.67 87.2 Os04g0527500 AK059144.1 - Hypothetical protein 3e+0 At5g65080 MAF5 (MADS AFFECTING FLOWERING 5) S.X. H.G.
0.40 51.1 Os12g0137500 Z54153.1 - PP2A regulatory subunit-like protein 2e-1 At5g53000 TAP46 (2A phosphatase associated protein of 46 kD) S.X. H.G.
0.22 19.4 Os08g0178300 AK068383.1 - Conserved hypothetical protein 8e-11 At1g31870 unknown protein S.X. H.G.
0.16 11.3 Os02g0180100 AK067359.1 - Peptidase C12, ubiquitin carboxyl-terminalhydrolase 1 family protein 8e-10 At1g65650 UCH2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.3 98.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.4 97.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.9 97.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
4.6 96.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.3 96.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.9 95.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.9 95.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.7 95.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.7 95.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-3 46 Os03g0386000 AK072984.1 - WD domain protein-like 3e-5 At1g78070 - C.G. S.X.
0.01 2e-3 46 Os04g0374400 9632.m02899 - - 7e-1 At5g55570 unknown protein C.G. S.X.
0.01 9e-3 44 Os01g0778800 AK100383.1 - Peptidase M16, C-terminal domain containingprotein 7e-9 At2g41790 peptidase M16 family protein / insulinase family protein C.G. S.X.
0.01 9e-3 44 Os03g0192800 AK110648.1 - Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein 1e-5 At3g49600 UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26) C.G. S.X.
0.01 9e-3 44 Os09g0440200 AK073097.1 - BRCT domain containing protein 7e-2 At1g54060 ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1) C.G. S.X.
0.01 4e-2 42 Os04g0287400 AK100954.1 - WRKY transcription factor 51 1e-2 At4g31550 WRKY11 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-2 42 Arabidopsis thaliana At2g46900 819303 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA - - - C.G. S.X.
0.14 8e-15 83 Glycine max GmaAffx.72544.1.S1_at BE556443 - - 3e-13 At2g46900 - C.G. S.X.
0.41 1e-171 603 Hordeum vulgare Contig19945_at Contig19945 - - 4e-1 At3g55010 PUR5 C.G. S.X.
0.10 3e-11 71 Populus trichocarpa PtpAffx.202317.1.S1_at pmrna4642 hypothetical protein - 7e-13 At2g46900 - C.G. S.X.
0.02 8e-2 40 Triticum aestivum TaAffx.118723.1.S1_at BJ312537 - - 7e-2 Atmg00530 - C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1611397_at CA818560 - - 4e+0 At3g59490 unknown protein C.G. S.X.
0.01 1e-1 38 Zea mays Zm.10441.1.S1_at BQ528688 - - 9e-2 At4g21010 transcription initiation factor-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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