Gene omics information

Query gene ID Os09g0488000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3846.9Os09g0488000AK063214.1-GCN5-related N-acetyltransferase domain containingprotein4e-1At5g42300UBL5 (UBIQUITIN-LIKE PROTEIN 5)S.X.H.G.
0.6079.7Os07g0633800AK103878.1-Conserved hypothetical protein2e+0At1g60870MEE9 (maternal effect embryo arrest 9)S.X.H.G.
0.2831.1Os02g0553600AK072440.1-Transcriptional coactivator p15 family protein3e-1At5g65220ribosomal protein L29 family proteinS.X.H.G.
0.2727.5Os01g0253600AB111915.1-Nucleic acid-binding OB-fold domain containingprotein4e-1At3g0492040S ribosomal protein S24 (RPS24A)S.X.H.G.
0.2321.2Os06g0150100AK068890.1-Conserved hypothetical protein6e-1At4g04780MED21 (MEDIATOR 21)S.X.H.G.
0.2219.4Os03g0699400AK069110.1-N-acetyltransferase 5 (EC 2.3.1.-)3e-27At1g03150GCN5-related N-acetyltransferase (GNAT) family proteinS.X.H.G.
0.105.7Os03g0824000AK111129.1-Conserved hypothetical protein1e+0At3g06780glycine-rich proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.898.5GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
9.597.9GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
8.997.8GSM302917endo6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
7.797.6GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
6.797.3GSM278845WuYun3-RSV infected, biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
5.396.7GSM67056FL478 salt stressed replicate 2GSE3053Rice salt expression
5.096.6GSM4094349311_young panicle 2cm, biological rep5GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.596.3GSM99881TCHW P23_ir29 salt stress, biological rep2GSE4438Expression data from rice under salinity stress
4.496.2GSM1952305d-seedGSE7951Genome-wide gene expression profiling of rice stigma
4.396.1GSM67061IR29 salt stressed replicate 2GSE3053Rice salt expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-552Os05g0552700AK108674.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein4e-3At4g15550IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)C.G.S.X.
0.032e-448Os10g0490100AK102387.1-Barwin-related endoglucanase domain containingprotein6e+0At4g24026unknown proteinC.G.S.X.
0.037e-446Os01g0618000AK064632.1-Exonuclease domain containing protein6e-1At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.022e-448Os01g0689800AK120572.1-Esterase/lipase/thioesterase domain containingprotein3e-28At5g38220hydrolaseC.G.S.X.
0.022e-448Os09g0533300AK073741.1-Phosphoesterase At2g46880 family protein3e-6At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136Arabidopsis thalianaAt5g42300834235UBL5 (UBIQUITIN-LIKE PROTEIN 5)F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MFPO---C.G.S.X.
0.041e-138Glycine maxPsAffx.psZO008iA10r_atPsAffx.psZO008iA10r--4e+0At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)C.G.S.X.
0.043e-342Hordeum vulgareHVSMEf0009A08r2_s_atHVSMEf0009A08r2--1e+1At4g32480unknown proteinC.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.217623.1.S1_atpmrna32964hypothetical protein-4e+0At4g24050short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.302e-86319Triticum aestivumTa.16483.2.A1_atBQ168730--3e-1At1g15840unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1611341_atCF210963--4e+0At5g38360catalyticC.G.S.X.
0.032e-136Zea maysZm.1926.1.A1_atCO521075hypothetical protein LOC100192826-8e-9At1g24440protein binding / zinc ion bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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