CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0482400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 96.4 Os09g0482400 D21284.1 - Heat shock protein 82 4e+0 At5g45360 F-box family protein S.X. H.G.
0.67 87.2 Os11g0660500 D12626.1 - Translationally controlled tumor protein familyprotein 2e-13 At3g16640 TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) S.X. H.G.
0.60 79.7 Os03g0177500 D63583.1 - EF-1 alpha 0 At1g07920 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
0.53 71.3 Os05g0489600 D17760.1 - NTGB1 (Fragment) 1e-73 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) S.X. H.G.
0.50 68.0 Os03g0670700 AK119242.1 - Glycine-rich RNA-binding protein GRP1A 2e-6 At4g39260 GR-RBP8 S.X. H.G.
0.40 51.1 Os11g0414000 AK071277.1 - contains InterPro domain(s): IPR003307 1e-52 At5g36230 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein S.X. H.G.
0.32 36.3 Os03g0177400 AK103738.1 - EF-1 alpha 0 At1g07920 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.9 94.5 GSM240994 Zhonghua11 7 DAF, biological replicate 1 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
2.9 94.5 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.8 94.3 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
2.7 94.1 GSM240996 Zhonghua11 7 DAF, biological replicate 3 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
2.7 94.1 GSM240999 gif1 7 DAF, biological replicate 3 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
2.6 93.8 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
2.5 93.6 GSM99863 TCHW P6_m103 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
2.5 93.6 GSM240995 Zhonghua11 7 DAF, biological replicate 2 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
2.4 93.3 GSM262009 IAC165, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.4 93.3 GSM240998 gif1 7 DAF, biological replicate 2 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 3319 Os09g0482100 AB111810.1 - Heat shock protein 82 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.57 0 1388 Os08g0500700 AK102426.1 - Heat shock protein 82 0 At5g56000 heat shock protein 81-4 (HSP81-4) C.G. S.X.
0.33 0 1005 Os09g0534600 AK065528.1 - Heat shock protein 82 5e-84 At5g56010 HSP81-3 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g45360 834572 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOB - - - C.G. S.X.
0.05 2e-2 40 Glycine max GmaAffx.92386.1.S1_at CF808111 - - 4e-77 At5g52640 ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) C.G. S.X.
0.25 2e-12 71 Hordeum vulgare rbags1d24_at rbags1d24 - - 7e-20 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.03 5e+0 32 Populus trichocarpa PtpAffx.37748.1.A1_at CV240667 hypothetical protein - 6e+0 At3g10990 F-box family protein C.G. S.X.
0.26 1e-27 123 Triticum aestivum TaAffx.85127.1.S1_at CA625373 - - 1e-2 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.06 2e-2 38 Vitis vinifera 1618009_at CD714666 similar to heat shock protein 90 - 0 At5g56000 heat shock protein 81-4 (HSP81-4) C.G. S.X.
0.12 1e-28 125 Zea mays Zm.16525.3.A1_x_at AI738309 deoxy xylulose synthase 2 - 7e-44 At5g56010 HSP81-3 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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