CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0475132

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os09g0475132 9637.m02664 - - 1e+1 At5g49280 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.29 31.1 Os11g0155500 9639.m00485 - Amino acid/polyamine transporter I family protein 4e-18 At5g04770 CAT6 (CATIONIC AMINO ACID TRANSPORTER 6) S.X. H.G.
0.17 12.6 Os02g0222400 9630.m01184 - - 2e-1 At1g06475 unknown protein S.X. H.G.
0.06 3.0 Os11g0499600 AK106189.1 - Short-chain dehydrogenase/reductase SDR familyprotein 1e-3 At3g47350 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.04 2.0 Os12g0151500 AK105865.1 - Glycosyl transferase, family 29 protein 1e+1 At5g29807 unknown protein S.X. H.G.
0.02 1.0 Os01g0225300 CA760234 - Conserved hypothetical protein 3e-19 At5g62650 unknown protein S.X. H.G.
0.01 0.5 Os03g0178000 D10400.1 - - 1e-54 At1g07930 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
0.01 0.5 Os04g0308100 AK100568.1 - The start codon is not identified. 2e-3 At1g34315 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.7 98.8 GSM281587 Rice mutant dst, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
16.4 98.8 GSM281583 Rice Zhonghua11, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
16.3 98.8 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
16.0 98.7 GSM281586 Rice mutant dst, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
11.9 98.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.9 98.3 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
8.5 97.7 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.5 97.7 GSM281584 Rice Zhonghua11, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
6.8 97.3 GSM262001 IAC165, 2 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.6 97.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 3e-24 113 Os04g0522700 9632.m04237 - - 3e-1 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.10 6e-56 218 Os09g0544800 AK105420.1 - Protein of unknown function DUF315 domaincontaining protein 4e-16 At4g38430 ROPGEF1 C.G. S.X.
0.04 2e+0 34 Os05g0215200 9633.m01110 - - 8e-1 At5g60680 unknown protein C.G. S.X.
0.03 2e+0 34 Os05g0163300 AK105598.1 - Beta-Ig-H3/fasciclin domain containing protein 6e-1 At1g29420 - C.G. S.X.
0.02 1e-1 38 Os01g0765000 AK101905.1 - Cytidine/deoxycytidylate deaminase, zinc-bindingregion domain containing protein 1e-17 At3g48540 cytidine/deoxycytidylate deaminase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana At5g49280 834988 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVA - - - C.G. S.X.
0.04 5e+0 32 Glycine max PsAffx.psHA007iG07r_s_at PsAffx.psHA007iG07r - - 3e+0 At4g03050 AOP3 C.G. S.X.
0.02 2e+0 32 Hordeum vulgare Contig20580_at Contig20580 - - 7e+0 At3g18560 unknown protein C.G. S.X.
0.03 2e+1 30 Populus trichocarpa PtpAffx.249.387.A1_at CV226521 - - 1e+0 At3g52630 - C.G. S.X.
0.04 4e+0 32 Triticum aestivum Ta.6000.2.S1_a_at CA597404 - - 4e+0 At5g53000 TAP46 (2A phosphatase associated protein of 46 kD) C.G. S.X.
0.03 2e+1 28 Vitis vinifera 1616819_at CD801479 - - 1e-2 At3g15610 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.04 6e+0 30 Zea mays Zm.7284.1.A1_at CO531393 HYP1 - 3e-1 At2g25482 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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