CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0471200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os09g0471200 9637.m02620 - Protein kinase domain containing protein 8e-8 At1g79670 RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1) S.X. H.G.
0.39 48.3 Os01g0956800 9629.m07190 - Disease resistance protein family protein 9e-2 At5g17680 disease resistance protein (TIR-NBS-LRR class), putative S.X. H.G.
0.36 44.0 Os04g0307866 9632.m02266 - - 3e-3 At3g47380 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.33 38.8 Os07g0588400 9635.m03987 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 1e-19 At4g33880 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.31 34.5 Os09g0408200 9637.m02078 - - 5e-1 At5g45580 transcription factor S.X. H.G.
0.24 22.4 Os09g0270700 9637.m00734 - NB-ARC domain containing protein 3e-1 At1g57620 emp24/gp25L/p24 family protein S.X. H.G.
0.22 19.4 Os04g0548100 AK065659.1 - Disease resistance protein family protein 1e-7 Atcg00510 - S.X. H.G.
0.22 19.4 Os04g0675800 9632.m05833 - Cyclin-like F-box domain containing protein 5e-1 At4g16295 SPH1 (S-PROTEIN HOMOLOGUE 1) S.X. H.G.
0.18 13.7 Os01g0946800 NM_186132.1 - Cold shock protein-1 4e-1 At4g26230 60S ribosomal protein L31 (RPL31B) S.X. H.G.
0.14 9.3 Os11g0590900 9639.m03433 - Disease resistance protein family protein 1e+0 At1g36675 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.6 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.7 99.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.9 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 6e-44 180 Os09g0471800 AK071360.1 - EGF-like calcium-binding domain containing protein 5e-6 At2g37050 kinase C.G. S.X.
0.34 1e-45 186 Os09g0471600 AK119296.1 - Protein kinase domain containing protein 7e-9 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.26 9e-37 157 Os09g0471500 AK111541.1 - Protein kinase domain containing protein 5e-3 At1g16150 WAKL4 (WALL ASSOCIATED KINASE-LIKE 4) C.G. S.X.
0.25 5e-23 111 Os09g0471400 AK060211.1 - Protein kinase domain containing protein 8e-4 At1g16150 WAKL4 (WALL ASSOCIATED KINASE-LIKE 4) C.G. S.X.
0.15 6e-10 67 Os06g0170100 9634.m00665 - Protein kinase domain containing protein 3e-7 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-8 59 Arabidopsis thaliana At1g79670 844306 RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1) Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races. - - - C.G. S.X.
0.03 1e-1 40 Glycine max GmaAffx.85374.1.S1_at BI317002 - - 2e-7 At5g49760 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.19 8e-34 145 Hordeum vulgare Contig12770_at Contig12770 - - 2e-4 At3g17410 serine/threonine protein kinase, putative C.G. S.X.
0.03 4e-7 57 Populus trichocarpa PtpAffx.206269.1.S1_at pmrna12434 hypothetical protein - 5e-7 At5g02070 protein kinase-related C.G. S.X.
0.14 6e-15 83 Triticum aestivum TaAffx.78449.1.S1_at CA732387 - - 8e-1 At2g17170 protein kinase family protein C.G. S.X.
0.03 6e-6 52 Vitis vinifera 1615495_at CB978751 hypothetical protein LOC100246196 - 2e-5 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.02 2e-3 44 Zea mays Zm.7753.1.A1_at BM337798 hypothetical protein LOC100191438 - 3e-2 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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