CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0462300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os09g0462300 9637.m02532 - Esterase/lipase/thioesterase domain containingprotein 3e+0 At5g16200 50S ribosomal protein-related S.X. H.G.
0.55 73.7 Os07g0216100 AK107820.1 - Hypothetical protein 9e-2 At5g66490 unknown protein S.X. H.G.
0.29 31.1 Os09g0433500 9637.m02294 - Glycosyl transferase, family 31 protein 5e-1 At3g29300 unknown protein S.X. H.G.
0.26 25.6 Os01g0176700 AK109808.1 - Myb, DNA-binding domain containing protein 1e-12 At2g03500 myb family transcription factor S.X. H.G.
0.22 19.4 Os02g0602600 9630.m03753 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 3e+0 At5g24316 proline-rich family protein S.X. H.G.
0.11 6.5 Os03g0118100 AK072029.1 - Conserved hypothetical protein 2e-1 At4g15460 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
34.9 99.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Os08g0475300 9636.m03721 - Esterase/lipase/thioesterase domain containingprotein 7e+0 At5g03400 unknown protein C.G. S.X.
0.03 3e-2 40 Os11g0701000 AB027424.1 - Class III chitinase homologue (OsChib3H-c) 2e-1 At4g20470 unknown protein C.G. S.X.
0.02 3e-2 40 Os12g0506500 AK119779.1 - - 5e-2 At2g35360 ubiquitin family protein C.G. S.X.
0.02 3e-2 40 Os12g0506600 AK106422.1 - Hypothetical protein 7e-2 At2g35360 ubiquitin family protein C.G. S.X.
0.02 1e-1 38 Os06g0352200 AK071746.1 - Protein of unknown function DUF679 family protein 2e+0 At5g27370 unknown protein C.G. S.X.
0.02 4e-1 36 Os12g0568600 9640.m03702 - - 1e-2 At4g30370 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 1e-1 38 Os01g0207400 AK109337.2 - Hypothetical protein 3e-1 At4g36020 CSDP1 (cold shock domain protein 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At5g16200 831478 50S ribosomal protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.05 5e+0 32 Glycine max PsAffx.psMC010xG09f_at PsAffx.psMC010xG09f - - 1e+1 At1g72175 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 7e-3 40 Hordeum vulgare Contig13949_at Contig13949 - - 1e+0 At3g45990 actin-depolymerizing factor, putative C.G. S.X.
0.03 3e-4 46 Populus trichocarpa PtpAffx.90122.1.S1_at CK092046 - - 4e-2 At1g68620 hydrolase C.G. S.X.
0.04 1e-2 40 Triticum aestivum Ta.23434.2.S1_a_at CA636549 - - 4e+0 At5g16200 50S ribosomal protein-related C.G. S.X.
0.04 7e-2 36 Vitis vinifera 1606522_at CB977214 hypothetical protein LOC100245277 - 1e+0 At3g44070 beta-galactosidase C.G. S.X.
0.03 4e-1 34 Zea mays Zm.17163.1.A1_at BM378304 - - 1e+0 At2g24870 self-incompatibility protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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