Gene omics information

Query gene ID	Os09g0461700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	68.0	Os09g0461700	AK066139.1	-	Esterase/lipase/thioesterase domain containingprotein	2e-1	At5g16080	AtCXE17 (Arabidopsis thaliana carboxyesterase 17)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.67	87.2	Os07g0524000	AK063026.1	-	Conserved hypothetical protein	2e-3	At3g21710	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	31.1	Os11g0521000	AK108542.1	-	Hypothetical protein	6e-1	At1g28640	GDSL-motif lipase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	27.5	Os03g0719000	AK108923.1	-	MAP65/ASE1 family protein	5e-2	At1g52890	ANAC019 (Arabidopsis NAC domain containing protein 19)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.23	21.2	Os07g0175500	AU085735	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	5e+0	At2g39710	aspartyl protease family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.19	15.1	Os08g0108300	AK063596.1	-	Pistil-specific extensin-like protein familyprotein	6e-1	At4g05430	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.0	99.0	GSM359924	Pokkali root, salt-treated, biological replicate 3	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
16.1	98.7	GSM359907	FL478 root, salt-treated, biological replicate 3	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.1	98.6	GSM359921	Pokkali root, control, biological replicate 3	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
13.5	98.5	GSM359918	IR63731 root, salt-treated, biological replicate 3	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
11.4	98.2	GSM359905	FL478 root, salt-treated, biological replicate 1	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
11.0	98.2	GSM359922	Pokkali root, salt-treated, biological replicate 1	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.4	97.9	GSM377086	Genomic DNA - 45 day old leaf sample - IR64 wtcheck	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2	97.9	GSM377075	Genomic DNA - 45 day old leaf sample - mutant g650	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2	97.9	GSM359920	Pokkali root, control, biological replicate 2	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.0	97.8	GSM359919	Pokkali root, control, biological replicate 1	GSE14403	Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	1e-22	109	Os09g0460300	AK071569.1	-	Esterase/lipase/thioesterase domain containingprotein	1e-2	At5g06570	hydrolase	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.17	2e-21	105	Os09g0460400	AK067180.1	-	Esterase/lipase/thioesterase domain containingprotein	9e+0	At5g06570	hydrolase	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	2e-18	95	Os08g0475000	9636.m03719	-	Esterase/lipase/thioesterase domain containingprotein	2e+0	At5g23530	AtCXE18 (Arabidopsis thaliana carboxyesterase 18)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.09	2e-8	61	Os09g0455500	AK065686.1	-	Esterase/lipase/thioesterase domain containingprotein	1e+1	At5g46030	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.08	6e-9	63	Os06g0214300	AK108107.1	-	Esterase/lipase/thioesterase domain containingprotein	8e-1	At2g45600	hydrolase	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	1e-13	79	Os08g0475100	AK105839.1	-	Esterase/lipase/thioesterase domain containingprotein	7e-1	At5g16080	AtCXE17 (Arabidopsis thaliana carboxyesterase 17)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.05	6e-12	73	Os09g0461500	AK102328.1	-	Esterase/lipase/thioesterase domain containingprotein	2e-4	At5g23530	AtCXE18 (Arabidopsis thaliana carboxyesterase 18)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	38	Arabidopsis thaliana	At5g16080	831465	AtCXE17 (Arabidopsis thaliana carboxyesterase 17)	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-1	38	Glycine max	GmaAffx.58907.1.S1_s_at	BE584346	-	-	2e-5	At2g45600	hydrolase	C.G.	S.X.	Please select
0.10	9e-2	38	Hordeum vulgare	Contig13664_at	Contig13664	-	-	9e+0	At5g58590	RANBP1 (RAN BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.02	1e+0	36	Populus trichocarpa	PtpAffx.219066.1.S1_at	pmrna34870	hypothetical protein	-	4e+0	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	4e-58	226	Triticum aestivum	TaAffx.121097.1.S1_at	CA679906	-	-	1e+0	At2g36026	-	C.G.	S.X.	Please select
0.03	3e+0	32	Vitis vinifera	1615633_at	CA813996	hypothetical protein LOC100243547	-	1e-7	At2g03550	hydrolase	C.G.	S.X.	Please select
0.15	2e-8	59	Zea mays	Zm.19022.1.S1_at	CO526898	hypothetical protein LOC100273481	-	7e-1	At5g06570	hydrolase	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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