CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0455500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os09g0455500 AK065686.1 - Esterase/lipase/thioesterase domain containingprotein 1e+1 At5g46030 unknown protein S.X. H.G.
0.55 73.7 Os07g0659300 AK069789.1 - Conserved hypothetical protein 2e+0 At4g24805 methyltransferase S.X. H.G.
0.38 46.9 Os05g0512200 CB623703 - Conserved hypothetical protein 2e-12 At3g01060 unknown protein S.X. H.G.
0.15 10.3 Os01g0352100 AK072222.1 - 2OG-Fe(II) oxygenase domain containing protein 7e-1 At3g47650 bundle-sheath defective protein 2 family / bsd2 family S.X. H.G.
0.07 3.7 Os04g0638100 AK103592.1 - Transferase family protein 1e+1 Atmg00300 - S.X. H.G.
0.04 2.0 Os10g0556200 CB624216 - SPATULA 8e-3 At4g00050 UNE10 (unfertilized embryo sac 10) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.9 99.9 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
19.7 99.1 GSM278852 KT95-418-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
18.6 99.0 GSM278853 KT95-418-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
18.0 98.9 GSM278850 KT95-418-RSV infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
15.5 98.7 GSM278848 WuYun3-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
12.4 98.3 GSM278849 WuYun3-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
11.5 98.2 GSM278844 WuYun3-RSV infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.8 98.1 GSM278851 KT95-418-RSV infected,biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.4 97.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.3 97.7 GSM278854 KT95-418-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 6e-18 93 Os08g0475000 9636.m03719 - Esterase/lipase/thioesterase domain containingprotein 2e+0 At5g23530 AtCXE18 (Arabidopsis thaliana carboxyesterase 18) C.G. S.X.
0.11 5e-77 289 Os08g0149000 AK100458.1 - Peptidase, trypsin-like serine and cysteineproteases domain containing protein 4e-1 At3g58660 60S ribosomal protein-related C.G. S.X.
0.10 2e-48 194 Os05g0397300 AK062621.1 - Conserved hypothetical protein 1e+0 At5g28610 - C.G. S.X.
0.06 4e-16 87 Os09g0461500 AK102328.1 - Esterase/lipase/thioesterase domain containingprotein 2e-4 At5g23530 AtCXE18 (Arabidopsis thaliana carboxyesterase 18) C.G. S.X.
0.05 1e-16 89 Os06g0214300 AK108107.1 - Esterase/lipase/thioesterase domain containingprotein 8e-1 At2g45600 hydrolase C.G. S.X.
0.05 6e-12 73 Os09g0460400 AK067180.1 - Esterase/lipase/thioesterase domain containingprotein 9e+0 At5g06570 hydrolase C.G. S.X.
0.03 5e-37 157 Os04g0111900 AK121138.1 - Vrga1 6e-2 At2g14288 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 32 Arabidopsis thaliana At5g46030 834644 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.81233.1.A1_at BE823605 - - 3e+0 At5g58650 PSY1 (plant peptide containing sulfated tyrosine 1) C.G. S.X.
0.08 2e-11 69 Hordeum vulgare Contig5705_at Contig5705 - - 4e-2 At5g06570 hydrolase C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.222916.1.S1_at pmrna40642 hypothetical protein - 3e-2 At2g46375 unknown protein C.G. S.X.
0.21 2e-13 77 Triticum aestivum TaAffx.121097.1.S1_at CA679906 - - 1e+0 At2g36026 - C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1622421_at CF568853 - - 1e-52 At5g56870 BGAL4 (beta-galactosidase 4) C.G. S.X.
0.11 1e-6 54 Zea mays Zm.19022.1.S1_at CO526898 hypothetical protein LOC100273481 - 7e-1 At5g06570 hydrolase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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