CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0447300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os09g0447300 CB675967 - Cytochrome P450 family protein 2e+0 At3g52060 unknown protein S.X. H.G.
0.78 93.4 Os07g0639200 9635.m04476 - - 3e+0 At3g14840 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.78 93.4 Os08g0129400 9636.m00269 - - 4e+0 At1g22520 unknown protein S.X. H.G.
0.74 91.4 Os01g0282400 NM_187704.1 - - 2e+1 At5g25280 serine-rich protein-related S.X. H.G.
0.68 87.5 Os01g0541900 CB622869 - Protein kinase domain containing protein 1e+0 At3g28250 glycosyl hydrolase family protein 17 S.X. H.G.
0.65 83.8 Os01g0152500 NM_184401.1 - SWIM Zn-finger domain containing protein 3e-1 At3g24830 60S ribosomal protein L13A (RPL13aB) S.X. H.G.
0.44 58.1 Os09g0335300 9637.m01393 - - 3e-2 At5g67490 unknown protein S.X. H.G.
0.43 55.4 Os04g0334580 9632.m02511 - - 3e-1 At2g14700 unknown protein S.X. H.G.
0.42 53.9 Os01g0900400 9629.m06700 - Lipase, class 3 family protein 6e-1 At3g27270 - S.X. H.G.
0.40 51.1 Os12g0202800 9640.m00954 - 0-methyltransferase (EC 2.1.1.6) (Fragment) 7e-1 At4g35150 O-methyltransferase family 2 protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
251.6 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.0 97.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM262004 IAC165, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.3 97.2 GSM262009 IAC165, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.3 96.7 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.1 96.6 GSM262005 IAC165, 4 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.1 96.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM262008 IAC165, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.4 96.2 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 5e-8 59 Os10g0166600 AK108519.1 - Cytochrome P450 family protein 2e-1 At1g33730 CYP76C5 C.G. S.X.
0.04 1e-5 52 Os02g0569900 AK105913.1 - Cytochrome P450 family protein 3e+0 At1g79010 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) C.G. S.X.
0.02 5e-5 50 Os06g0607700 AK106792.1 - ABC transporter related domain containing protein 1e-9 At3g13220 ABC transporter family protein C.G. S.X.
0.02 8e-4 46 Os12g0563000 9640.m03651 - Phospholipid/glycerol acyltransferase familyprotein 2e-1 At3g50250 unknown protein C.G. S.X.
0.01 5e-5 50 Os01g0524700 AK105413.1 - ARM repeat fold domain containing protein 5e-4 At1g23180 armadillo/beta-catenin repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At3g52060 824369 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB - - - C.G. S.X.
0.04 9e-3 42 Glycine max PsAffx.psZS006xI19f_s_at PsAffx.psZS006xI19f - - 9e-2 At5g05910 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 1e-2 40 Hordeum vulgare Contig6632_s_at Contig6632 - - 2e-3 At5g37200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 2e+0 34 Populus trichocarpa PtpAffx.220541.1.S1_at pmrna36945 - - 3e+0 At4g02230 60S ribosomal protein L19 (RPL19C) C.G. S.X.
0.04 7e-6 52 Triticum aestivum Ta.5540.3.S1_at CA664056 - - 4e-3 At3g22070 proline-rich family protein C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1610294_at CF373126 - - 4e-13 At4g25835 AAA-type ATPase family protein C.G. S.X.
0.04 1e-2 40 Zea mays Zm.4138.2.A1_at AI881954 - - 3e+0 At1g09250 transcription factor C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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