CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0436300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os09g0436300 AK103151.1 - Peptidase, trypsin-like serine and cysteineproteases domain containing protein 8e-1 At5g22610 F-box family protein S.X. H.G.
0.55 73.7 Os08g0543100 9636.m04377 - Disease resistance protein family protein 1e-1 At2g07340 prefoldin-related KE2 family protein S.X. H.G.
0.50 68.0 Os12g0129000 9640.m00264 - Eukaryotic protein of unknown function DUF872family protein 3e-1 At5g65350 histone H3 S.X. H.G.
0.48 63.7 Os07g0610400 9635.m04199 - - 6e+0 At4g25890 60S acidic ribosomal protein P3 (RPP3A) S.X. H.G.
0.38 46.9 Os09g0101100 AK120565.1 - - 5e-1 At3g07425 unknown protein S.X. H.G.
0.35 41.7 Os09g0406900 AK067460.1 - Conserved hypothetical protein 4e-1 At1g06320 unknown protein S.X. H.G.
0.24 22.4 Os04g0380200 AK104769.1 - Conserved hypothetical protein 1e-1 At3g27210 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
176.6 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.1 99.2 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.2 97.1 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.0 95.9 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
3.2 94.9 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
2.9 94.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
2.8 94.3 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.3 93.0 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
2.3 93.0 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
2.3 93.0 GSM262000 IAC165, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 5e-130 466 Os09g0436200 AK109570.1 - - 3e+0 At5g15220 ribosomal protein L27 family protein C.G. S.X.
0.02 3e-2 42 Os09g0334401 9637.m01384 - - 6e-1 At2g23320 WRKY15 C.G. S.X.
0.02 2e+0 36 Os01g0771300 AK062308.1 - Conserved hypothetical protein 1e+0 At5g55570 unknown protein C.G. S.X.
0.01 1e-1 40 Os01g0732900 NM_191548.1 - Hypothetical protein 5e+0 At2g35100 ARAD1 (ARABINAN DEFICIENT 1) C.G. S.X.
0.01 1e-1 40 Os08g0301600 AK072190.1 - Conserved hypothetical protein 2e+0 At3g59620 - C.G. S.X.
0.01 4e-1 38 Os05g0158200 AK060561.1 - Peptidase, trypsin-like serine and cysteineproteases domain containing protein 1e+0 At3g18590 plastocyanin-like domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 8e-1 36 Arabidopsis thaliana At5g22610 832324 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM - - - C.G. S.X.
0.02 7e-2 40 Glycine max GmaAffx.79885.1.S1_at AI974071 - - 8e-1 At4g02230 60S ribosomal protein L19 (RPL19C) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare S0000800248D01F1_s_at S0000800248D01F1 - - 3e+0 At3g23380 RIC5 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 5) C.G. S.X.
0.01 1e+0 36 Populus trichocarpa PtpAffx.212869.1.S1_at pmrna25182 chromatin remodeling complex subunit - 4e-5 At5g14170 CHC1 C.G. S.X.
0.02 9e-1 36 Triticum aestivum TaAffx.23342.1.S1_at CA736319 - - 7e+0 At3g52590 UBQ1 (UBIQUITIN EXTENSION PROTEIN 1) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1616655_at CF207273 hypothetical protein LOC100250762 - 4e+0 At4g34480 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.02 6e+0 32 Zea mays ZmAffx.1081.1.A1_at AI948368 spotted leaf protein 11 - 1e+1 At5g23950 C2 domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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