CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0433500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os09g0433500 9637.m02294 - Glycosyl transferase, family 31 protein 5e-1 At3g29300 unknown protein S.X. H.G.
0.36 44.0 Os06g0277500 NM_196635.1 - - 6e-3 At3g59060 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) S.X. H.G.
0.21 17.9 Os03g0118100 AK072029.1 - Conserved hypothetical protein 2e-1 At4g15460 glycine-rich protein S.X. H.G.
0.15 10.3 Os04g0551500 AK068749.1 - SBP domain containing protein 3e-3 At3g06410 nucleic acid binding / zinc ion binding S.X. H.G.
0.11 6.5 Os06g0645600 9634.m04231 - Conserved hypothetical protein 3e+0 At1g56530 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.10 5.7 Os02g0738300 AK108113.1 - Conserved hypothetical protein 1e-1 At4g14695 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.5 99.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.4 99.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.3 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.6 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.0 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.4 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.6 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-8 61 Os05g0552200 AK064636.1 - Glycosyl transferase, family 31 protein 6e-1 At5g57500 transferase, transferring glycosyl groups C.G. S.X.
0.21 2e-17 91 Os02g0785000 AK103670.1 - Conserved hypothetical protein 4e-2 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.20 2e-11 71 Os09g0433000 AK063243.1 - Conserved hypothetical protein 4e+0 At2g42360 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.15 3e-13 77 Os02g0785200 9630.m05393 - - 2e+0 At3g45540 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.14 6e-11 69 Os09g0432900 AK106115.1 - Glycosyl transferase, family 31 protein 3e+0 At3g50830 COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2) C.G. S.X.
0.03 2e-1 38 Os07g0628100 NM_193053.1 - - 2e+1 At5g63400 ADK1 (ADENYLATE KINASE 1) C.G. S.X.
0.02 2e-4 48 Os02g0468400 CB667542 - Lipid-binding START domain containing protein 1e-3 At1g55960 - C.G. S.X.
0.02 3e-3 44 Os05g0228000 AK064229.1 - Purine and other phosphorylases, family 1 protein 1e-2 At4g28940 catalytic C.G. S.X.
0.02 1e-2 42 Os10g0155100 AK108770.1 - Curculin-like (mannose-binding) lectin domaincontaining protein 3e+0 At3g04970 zinc finger (DHHC type) family protein C.G. S.X.
0.02 5e-2 40 Os01g0545900 9629.m03448 - TPR-like domain containing protein 3e+0 At2g20720 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g57070 835811 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVA - - - C.G. S.X.
0.03 6e-1 36 Glycine max PsAffx.CL1363Contig1_at PsAffx.CL1363Contig1 - - 2e-23 At5g20570 RBX1 (RING-BOX 1) C.G. S.X.
0.03 5e-2 38 Hordeum vulgare Contig11109_at Contig11109 - - 1e-10 At4g10480 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative C.G. S.X.
0.03 9e+0 32 Populus trichocarpa PtpAffx.692.36.S1_at CK097610 hypothetical protein - 5e-1 At5g67490 unknown protein C.G. S.X.
0.03 2e-3 44 Triticum aestivum TaAffx.112304.2.S1_x_at CA619303 - - 3e-1 At2g16850 PIP2 C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1610455_at CD006453 hypothetical protein LOC100251100 - 1e-9 At4g19170 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) C.G. S.X.
0.02 2e-1 36 Zea mays Zm.10120.1.A1_at BM380514 DNA binding like - 5e+0 At1g05720 selenoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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