CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0415800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os09g0415800 AK071371.1 - Phosphofructokinase family protein 5e-18 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) S.X. H.G.
0.73 91.1 Os04g0620500 CB667511 - Hypothetical protein 2e-2 At1g30470 SIT4 phosphatase-associated family protein S.X. H.G.
0.67 87.2 Os12g0556400 AK062903.1 - Conserved hypothetical protein 2e-5 At1g16000 unknown protein S.X. H.G.
0.42 53.9 Os01g0496900 AK069894.1 - P-type trefoil domain containing protein 2e-39 At3g16200 unknown protein S.X. H.G.
0.31 34.5 Os03g0253800 AK120111.1 - Hypothetical protein 9e-8 At4g00026 - S.X. H.G.
0.31 34.5 Os09g0537600 AK061004.1 - Cyclophilin B 3e-18 At4g34960 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.8 98.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.2 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1 97.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.6 97.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.5 97.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.9 97.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 3e-169 597 Os08g0439000 9636.m03415 - Phosphofructokinase family protein 3e-9 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.35 2e-19 99 Os10g0405600 AK065250.1 - Phosphofructokinase family protein 1e-9 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.01 2e-3 46 Os06g0151900 AK058759.1 - Hypothetical protein 1e-4 At5g56630 PFK7 (PHOSPHOFRUCTOKINASE 7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-18 93 Arabidopsis thaliana At2g22480 816781 PFK5 (PHOSPHOFRUCTOKINASE 5) F:6-phosphofructokinase activity;P:glycolysis;C:6-phosphofructokinase complex, chloroplast;BOMFPAV - - - C.G. S.X.
0.16 1e-13 79 Glycine max GmaAffx.31381.1.S1_at BU546030 - - 5e-50 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.54 0 638 Hordeum vulgare Contig12502_at Contig12502 - - 2e-11 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.15 4e-13 77 Populus trichocarpa PtpAffx.111048.1.S1_at BU883776 hypothetical protein - 2e-94 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.20 4e-40 167 Triticum aestivum TaAffx.108916.2.S1_at CA682446 - - 2e-5 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
0.02 5e+0 32 Vitis vinifera 1619631_at CF610109 hypothetical protein LOC100242366 - 4e-19 At5g15470 GAUT14 (Galacturonosyltransferase 14) C.G. S.X.
0.22 5e-81 301 Zea mays Zm.9445.1.A1_at CD446257 - - 2e-8 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006096 The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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