Gene omics information

Query gene ID Os09g0408000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6079.7Os09g0408000AK059658.1-Conserved hypothetical protein2e-11At3g50590nucleotide bindingS.X.H.G.
0.6787.2Os07g0564700AK059018.1-Hypothetical protein5e-18At3g43300ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7)S.X.H.G.
0.6382.7Os03g0711400AK100286.1-Coatomer alpha subunit4e-79At1g62020coatomer protein complex, subunit alpha, putativeS.X.H.G.
0.5573.7Os01g0653800AK111531.1-WD40-like domain containing protein1e-32At5g24710-S.X.H.G.
0.3032.7Os03g0265700AK068453.1-SH3 domain containing protein6e-50At2g07360SH3 domain-containing proteinS.X.H.G.
0.2219.4Os12g0104800AK058259.1--2e-138At3g08530clathrin heavy chain, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.7GSM159201Inflorescence (P5, 15 - 22 cm), biological rep 1GSE6893Expression data for reproductive development in rice
5.096.6GSM429983Rice mutant phoenix (pho) panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.796.4GSM429982Rice wild-type panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.696.3GSM159202Inflorescence (P5, 15 - 22 cm), biological rep 2GSE6893Expression data for reproductive development in rice
4.596.3GSM159190Young inflorescence (P1, upto 3 cm), biological rep 2GSE6893Expression data for reproductive development in rice
3.995.8GSM99877TCHW P19_ir29 control, biological rep1GSE4438Expression data from rice under salinity stress
3.895.7GSM409428Nipponbare_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.895.7GSM99878TCHW P20_ir29 control, biological rep2GSE4438Expression data from rice under salinity stress
3.895.7GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in rice
3.895.7GSM429984Rice wild-type panicle rep2GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-140Os07g0232800AY324148.1-Zinc transporter ZIP family protein1e-5At4g19680IRT2C.G.S.X.
0.011e+038Os06g0652300BI812416-21556- 224944e-2At1g62350-C.G.S.X.
0.012e+036Os02g0528900AK105293.1-PDR9 ABC transporter8e-6At4g15215PDR13C.G.S.X.
0.012e+036Os05g0331200AK100884.1-External rotenone-insensitive NADPH dehydrogenase7e-8At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.012e+036Os11g0302800AK064557.1-Protein of unknown function DUF724 family protein1e+0At5g53000TAP46 (2A phosphatase associated protein of 46 kD)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-1171Arabidopsis thalianaAt3g50590824223nucleotide bindingF:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPV---C.G.S.X.
0.141e-656Glycine maxGmaAffx.92345.1.S1_s_atCF808070--9e-45At3g50590nucleotide bindingC.G.S.X.
0.464e-146517Hordeum vulgareContig5985_atContig5985--1e-3At3g50590nucleotide bindingC.G.S.X.
0.211e-22109Populus trichocarpaPtp.6322.2.A1_a_atCV241840--4e-1At1g61810BGLU45 (BETA-GLUCOSIDASE 45)C.G.S.X.
0.281e-123444Triticum aestivumTa.6698.1.S1_atCK200349--2e-9At3g50590nucleotide bindingC.G.S.X.
0.091e-963Vitis vinifera1608593_atCB981729hypothetical protein LOC100254837-1e+0At2g27340-C.G.S.X.
0.460662Zea maysZm.5951.1.A1_atAI665912--3e-14At3g50590nucleotide bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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