CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0383400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os09g0383400 AK103385.1 - Helicase, C-terminal domain containing protein 9e-5 At1g59990 DEAD/DEAH box helicase, putative (RH22) S.X. H.G.
0.59 78.0 Os06g0283200 AK073829.1 - Zn-finger-like, PHD finger domain containingprotein 1e+0 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.55 73.7 Os05g0194000 AK107561.1 - Hypothetical protein 1e+0 At3g29300 unknown protein S.X. H.G.
0.38 46.9 Os01g0613900 AK119181.1 - Protein of unknown function UPF0052 and CofDfamily protein 1e-15 At2g34090 MEE18 (maternal effect embryo arrest 18) S.X. H.G.
0.38 46.9 Os10g0477200 AK067154.1 - TPR-like domain containing protein 6e-3 At3g21470 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.30 32.7 Os03g0326600 AK107632.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 3e-25 At1g09230 RNA recognition motif (RRM)-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
41.3 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.6 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.6 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.5 99.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.5 99.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.1 98.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-3 46 Os03g0758000 AY341859.1 - WRKY DNA binding protein 3e-6 At1g29860 WRKY71 C.G. S.X.
0.01 3e-3 46 Os02g0739900 CA763386 - Arabidopsis thaliana protein of unknown functionDUF813 family protein 2e+0 At4g03150 unknown protein C.G. S.X.
0.01 1e-2 44 Os05g0486100 AK119823.1 - Protein kinase domain containing protein 7e-9 At5g49760 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.01 4e-2 42 Os02g0568600 9630.m03432 - - 1e+0 At5g25940 early nodulin-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-5 50 Arabidopsis thaliana At1g59990 842293 DEAD/DEAH box helicase, putative (RH22) F:helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:biological_process unknown;C:chloroplast;BMOFPAV - - - C.G. S.X.
0.03 5e-4 48 Glycine max GmaAffx.19973.1.S1_at BU926440 - - 1e-2 At5g23950 C2 domain-containing protein C.G. S.X.
0.01 4e-2 40 Hordeum vulgare Contig18242_s_at Contig18242 - - 7e-3 At2g48130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.07 5e-4 48 Populus trichocarpa PtpAffx.208324.1.S1_at pmrna16549 hypothetical protein - 9e-16 At1g59990 DEAD/DEAH box helicase, putative (RH22) C.G. S.X.
0.36 5e-102 373 Triticum aestivum Ta.9786.1.S1_at CD907988 - - 3e-2 At1g59990 DEAD/DEAH box helicase, putative (RH22) C.G. S.X.
0.01 3e-2 40 Vitis vinifera 1609859_at CF414433 hypothetical protein LOC100253463 - 4e+0 At5g49230 HRB1 (HYPERSENSITIVE TO RED AND BLUE) C.G. S.X.
0.33 2e-111 402 Zea mays Zm.10872.1.A1_at BM075104 - - 1e-8 At1g59990 DEAD/DEAH box helicase, putative (RH22) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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