CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0364800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.29 31.1 Os09g0364800 AK068537.1 - Heavy metal transport/detoxification proteindomain containing protein 2e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related S.X. H.G.
0.13 8.2 Os08g0443800 AK110630.1 - CD9/CD37/CD63 antigen family protein 8e+0 At5g40981 unknown protein S.X. H.G.
0.11 6.5 Os02g0702100 AK108297.1 - Conserved hypothetical protein 1e+0 At4g17740 C-terminal processing protease, putative S.X. H.G.
0.07 3.7 Os02g0548700 AK106228.1 - U box domain containing protein 2e-1 At2g30560 glycine-rich protein S.X. H.G.
0.02 1.0 Os09g0459600 AK108735.1 - Calmodulin-binding protein phosphatase 8e-7 At1g68410 protein phosphatase 2C-related / PP2C-related S.X. H.G.
0.02 1.0 Os01g0113300 NM_183555.1 - Receptor-like kinase ARK1AS 1e-2 At3g22750 protein kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.1 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
16.5 98.8 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
16.2 98.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.1 98.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.7 98.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM159198 Inflorescence (P4, 10 - 15 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
10.7 98.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 5e-11 69 Os02g0711900 BM038288 - Conserved hypothetical protein 6e+0 At3g17130 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.06 5e-8 59 Os06g0500300 CB669548 - Hypothetical protein 3e+0 At5g66110 metal ion binding C.G. S.X.
0.04 4e-18 93 Os05g0567800 AK108622.1 - Integral membrane protein 3e-6 At1g75220 integral membrane protein, putative C.G. S.X.
0.04 8e-10 65 Os04g0244800 AK121488.1 - Heavy metal transport/detoxification proteindomain containing protein 5e-10 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) C.G. S.X.
0.03 1e-8 61 Os03g0152000 AK102357.1 - - 4e-2 At5g24580 copper-binding family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 40 Arabidopsis thaliana At1g22990 838907 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFM - - - C.G. S.X.
0.05 9e-6 52 Glycine max Gma.16425.2.S1_s_at AW099501 - - 3e-4 At5g66110 metal ion binding C.G. S.X.
0.11 5e-5 48 Hordeum vulgare Contig11751_at Contig11751 - - 1e-4 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) C.G. S.X.
0.05 5e-4 46 Populus trichocarpa PtpAffx.101268.1.A1_at CV257146 - - 4e-7 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.12 1e-7 57 Triticum aestivum Ta.4941.1.S1_at BT009077.1 - - 5e-4 At5g66110 metal ion binding C.G. S.X.
0.06 7e-6 50 Vitis vinifera 1609425_at CA815345 hypothetical protein LOC100254317 - 2e-5 At5g17450 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.18 7e-7 54 Zea mays Zm.11872.1.A1_at BM381418 metal ion binding protein - 7e-2 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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