CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0354900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os09g0354900 AK069410.1 - Conserved hypothetical protein 1e-2 At3g50550 unknown protein S.X. H.G.
0.77 93.1 Os07g0510800 AK058358.1 - RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein 1e-1 At5g07600 oleosin / glycine-rich protein S.X. H.G.
0.57 77.0 Os08g0413500 CB665620 - Protein of unknown function DUF1262 family protein 6e-1 At1g22940 TH1 (THIAMINE REQUIRING 1) S.X. H.G.
0.36 44.0 Os02g0223300 AK068568.1 - Conserved hypothetical protein 2e-1 At2g36026 - S.X. H.G.
0.22 19.4 Os08g0484200 9636.m03794 - Zn-finger, RING domain containing protein 7e-1 At2g17420 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) S.X. H.G.
0.10 5.7 Os01g0774200 AK120412.1 - - 8e-1 At1g13430 ST4C (SULFOTRANSFERASE 4C) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
126.5 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
69.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.2 98.2 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.7 98.1 GSM421717 MOCK, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.4 98.1 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.9 98.0 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.2 97.4 GSM421675 XOC, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.2 97.1 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.0 96.6 GSM421696 XOO, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
4.7 96.4 GSM421725 MOCK, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 4e-94 345 Os09g0106200 AK070749.1 - Nucleic acid-binding protein precursor 1e-3 At3g50550 unknown protein C.G. S.X.
0.15 2e-83 309 Os09g0565200 9637.m03347 - 31 kDa ribonucleoprotein, chloroplast precursor 2e-5 At4g24770 RBP31 (31-KDA RNA BINDING PROTEIN) C.G. S.X.
0.03 2e-3 44 Os03g0242300 AK065146.1 - Hypothetical protein 9e-1 At1g21460 nodulin MtN3 family protein C.G. S.X.
0.02 1e-4 48 Os04g0653200 AK073795.1 - Low affinity calcium transporter CAX2 (Fragment) 1e-6 At3g13320 CAX2 (CATION EXCHANGER 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-2 40 Arabidopsis thaliana At3g50550 824219 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVA - - - C.G. S.X.
0.04 9e-2 38 Glycine max GmaAffx.56121.1.A1_at BU544917 - - 5e-2 At1g34440 unknown protein C.G. S.X.
0.05 1e-4 46 Hordeum vulgare Contig2590_at Contig2590 - - 4e-32 At3g12390 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative C.G. S.X.
0.04 2e-2 40 Populus trichocarpa PtpAffx.211786.1.S1_at pmrna23119 hypothetical protein - 3e+0 At5g44578 unknown protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.6629.1.S1_x_at CK162414 - - 4e-1 At5g22200 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.04 7e-2 36 Vitis vinifera 1618133_at CF404967 hypothetical protein LOC100259114 - 2e-1 At5g28610 - C.G. S.X.
0.03 3e-2 38 Zea mays Zm.19029.1.A1_at CO530104 Hypothetical protein LOC100217187 - 1e-3 At3g50550 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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