CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0349600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os09g0349600 9637.m01544 - Protein kinase domain containing protein 3e-1 At5g20050 protein kinase family protein S.X. H.G.
0.47 62.3 Os02g0110600 AK061840.1 - Conserved hypothetical protein 6e-5 At5g61350 protein kinase family protein S.X. H.G.
0.43 55.4 Os03g0668500 AK064871.1 - Hypothetical protein 5e+0 At5g25160 ZFP3 (ZINC FINGER PROTEIN 3) S.X. H.G.
0.39 48.3 Os04g0423100 9632.m03324 - Aromatic-ring hydroxylase family protein 5e-1 At5g16380 unknown protein S.X. H.G.
0.37 45.0 Os05g0328000 AK107977.1 - Hypothetical protein 3e-1 At3g28500 60S acidic ribosomal protein P2 (RPP2C) S.X. H.G.
0.35 41.7 Os02g0180400 9630.m00798 - - 4e-2 At1g06475 unknown protein S.X. H.G.
0.35 41.7 Os04g0496800 BI811923 - Calcium-binding EF-hand domain containing protein 2e-1 At5g39720 AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN) S.X. H.G.
0.34 40.0 Os04g0655400 AK109273.1 - Protein kinase domain containing protein 2e+0 At5g46730 glycine-rich protein S.X. H.G.
0.27 27.5 Os10g0472201 9638.m02914 - - 3e+0 At4g26460 - S.X. H.G.
0.26 25.6 Os03g0392100 9631.m02709 - - 1e+0 At3g01230 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.8 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
38.2 99.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.2 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
20.5 99.1 GSM431936 Shoot- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
17.7 98.9 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
12.3 98.3 GSM431935 Shoot- -Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
9.9 98.0 GSM262000 IAC165, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.7 98.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.8 97.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1 97.7 GSM154940 Root_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 3e-79 297 Os09g0349100 9637.m01540 - Protein kinase family protein 8e-1 At5g06010 unknown protein C.G. S.X.
0.41 6e-93 343 Os09g0348600 9637.m01534 - Protein kinase domain containing protein 3e-4 At2g30740 serine/threonine protein kinase, putative C.G. S.X.
0.34 3e-33 145 Os09g0351700 CB631541 - Protein kinase family protein 4e-2 At5g01020 protein kinase family protein C.G. S.X.
0.20 3e-27 125 Os09g0356800 AK120189.1 - Protein kinase domain containing protein 1e-3 At2g19190 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) C.G. S.X.
0.17 8e-34 147 Os09g0349800 9637.m01547 - Protein kinase domain containing protein 1e+0 At5g66710 protein kinase, putative C.G. S.X.
0.17 7e-31 137 Os09g0350900 AB059567.1 - Protein kinase domain containing protein 9e-2 At2g05940 protein kinase, putative C.G. S.X.
0.15 4e-20 101 Os09g0358400 9637.m01632 - - 2e-3 At3g53080 galactose-binding lectin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Arabidopsis thaliana At5g20050 832127 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA - - - C.G. S.X.
0.03 4e-1 38 Glycine max GmaAffx.28993.1.A1_at BU548185 - - 4e-11 At1g25390 protein kinase family protein C.G. S.X.
0.02 2e-3 44 Hordeum vulgare Contig12884_at Contig12884 - - 9e-9 At1g06840 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 9e-2 40 Populus trichocarpa PtpAffx.205357.1.S1_at pmrna10606 hypothetical protein - 9e-34 At4g02630 protein kinase family protein C.G. S.X.
0.01 4e+0 34 Triticum aestivum TaAffx.81407.1.S1_at CA686442 - - 7e-2 At2g41970 protein kinase, putative C.G. S.X.
0.02 5e+0 32 Vitis vinifera 1621841_at BQ796797 hypothetical protein LOC100258708 - 9e-3 Atcg01000 - C.G. S.X.
0.08 8e-15 81 Zea mays Zm.18322.1.A1_at CO527573 hypothetical protein LOC100217265 - 1e+0 At2g47890 zinc finger (B-box type) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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