CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0320000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os09g0320000 9637.m01227 - - 2e-1 At4g10480 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative S.X. H.G.
0.71 89.6 Os03g0264800 9631.m01532 - AAA ATPase, central region domain containingprotein 1e-16 At1g04730 AAA-type ATPase family protein S.X. H.G.
0.61 81.2 Os08g0315200 AK106325.1 - Retrotransposon gag protein family protein 1e+0 At2g27710 60S acidic ribosomal protein P2 (RPP2B) S.X. H.G.
0.55 73.7 Os01g0136000 9629.m00355 - 16.9 kDa class I heat shock protein 1e-5 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) S.X. H.G.
0.50 68.0 Os12g0509400 AK072889.1 - Polyprotein 3e-1 At1g01380 ETC1 (ENHANCER OF TRY AND CPC 1) S.X. H.G.
0.46 60.9 Os07g0642000 NM_188821.1 - - 9e-4 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
72.6 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.7 99.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 4e-26 119 Os08g0426050 9636.m03303 - - 9e-2 At4g38950 kinesin motor family protein C.G. S.X.
0.03 4e-20 99 Os01g0787600 AK121948.1 - Ethylene-induced esterase 2e+0 At5g05830 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 3e-2 40 Os10g0561100 AK110882.1 - Quinone oxidoreductase 1e-3 At5g61510 NADP-dependent oxidoreductase, putative C.G. S.X.
0.03 1e-1 38 Os02g0297100 9630.m01857 - - 3e-2 At2g28160 FRU (FER-LIKE REGULATOR OF IRON UPTAKE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 36 Arabidopsis thaliana At4g10480 826640 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV - - - C.G. S.X.
0.04 3e-1 36 Glycine max GmaAffx.3905.3.S1_at BG047142 - - 1e+0 Atmg01230 - C.G. S.X.
0.04 1e-1 36 Hordeum vulgare Contig11527_at Contig11527 - - 1e+0 At1g76930 ATEXT4 (EXTENSIN 4) C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.63409.1.A1_at CV242002 hypothetical protein - 7e-1 At3g51680 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.04 2e-1 36 Triticum aestivum TaAffx.31583.1.S1_at CA612531 - - 1e-2 At2g42540 COR15A (COLD-REGULATED 15A) C.G. S.X.
0.04 7e-2 36 Vitis vinifera 1615118_at CF373171 hypothetical protein LOC100241584 - 1e+0 At4g36620 zinc finger (GATA type) family protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.6246.2.A1_at AI677558 - - 9e-7 At2g22080 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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