Gene omics information

Query gene ID Os09g0308900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5978.0Os09g0308900AK121946.1-Phosphoesterase, PA-phosphatase related familyprotein3e-6At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)S.X.H.G.
0.5068.0Os01g0723400AB053295.1-Malic oxidoreductase family protein7e-27At1g79750ATNADP-ME4 (NADP-malic enzyme 4)S.X.H.G.
0.3338.8Os05g0310500AK101093.1-Cathepsin B (Fragment)1e-33At1g02300cathepsin B-like cysteine protease, putativeS.X.H.G.
0.116.5Os07g0632800NM_193100.1-Protein kinase domain containing protein1e-48At1g14000VIK (VH1-INTERACTING KINASE)S.X.H.G.
0.084.2Os04g0525900AK065806.1-Major facilitator superfamily protein1e-18At5g64500membrane protein-relatedS.X.H.G.
0.063.0Os06g0644200D45383.1-Vacuolar H+-pyrophosphatase (EC 3.6.1.1)9e-175At1g15690AVP1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.496.2GSM149409Rice Azucena 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
4.196.0GSM304395Control for the stable transgenic rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
4.095.9GSM304394Stable transgenic rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.695.5GSM304397Control for the stable transgenic rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.695.5GSM255762wt collar chipGSE12097antiOsLIC collar chip
3.495.2GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.495.2GSM195226RootGSE7951Genome-wide gene expression profiling of rice stigma
3.495.2GSM304654Mutant stable line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.395.1GSM304653Mutant stable lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.294.9GSM35713414-day-old seedling, rep 3GSE14275Expression data for heat shock in rice seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.378e-126452Os08g0359200AK073298.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)6e-11At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.375e-124446Os08g0359100AK067740.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)2e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.163e-1171Os01g0693300AK101201.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)2e-11At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.095e-1687Os05g05499009633.m04439-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)9e-3At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.057e-654Os01g0666000AK070670.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)5e-8At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-654Arabidopsis thalianaAt1g15080838072LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.---C.G.S.X.
0.033e-448Glycine maxGmaAffx.30344.1.S1_atAW349341--5e-6At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.400797Hordeum vulgareContig8594_atContig8594--2e-17At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.192e-1171Populus trichocarpaPtpAffx.21027.1.A1_atBP931070hypothetical protein-1e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.440837Triticum aestivumTa.3559.1.S1_atBE213357--3e-9At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.022e-136Vitis vinifera1621823_atCF214240hypothetical protein LOC100253216-4e+0At5g66000unknown proteinC.G.S.X.
0.372e-89329Zea maysZm.8204.1.A1_atBM073273hypothetical protein LOC100193193-5e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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