CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0304800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.33 38.8 Os09g0304800 CB681576 - Conserved hypothetical protein 2e+0 At4g35320 unknown protein S.X. H.G.
0.36 44.0 Os01g0117200 AK120089.1 - ARK protein (Fragment) 1e-3 At5g18610 protein kinase family protein S.X. H.G.
0.35 41.7 Os09g0358400 9637.m01632 - - 2e-3 At3g53080 galactose-binding lectin family protein S.X. H.G.
0.15 10.3 Os09g0380600 AK063655.1 - Conserved hypothetical protein 1e+1 At5g67070 RALFL34 (ralf-like 34) S.X. H.G.
0.15 10.3 Os12g0499200 9640.m03053 - Hypothetical protein 3e-3 At5g19260 unknown protein S.X. H.G.
0.12 7.2 Os02g0615400 9630.m03879 - Leucine-rich repeat, plant specific containingprotein 2e+0 At1g25370 unknown protein S.X. H.G.
0.06 3.0 Os07g0541500 AK111550.1 - KI domain interacting kinase 1 3e-4 At4g23190 CRK11 (CYSTEINE-RICH RLK11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
100.3 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.6 99.5 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
23.2 99.3 GSM375775 slr1 (k1001)_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
22.7 99.3 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
20.7 99.2 GSM375777 slr1 (k1001)_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
20.6 99.1 GSM375773 slr1 (k1001)_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
18.7 99.0 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
18.3 98.9 GSM154958 Leaf_control_replicate 2 GSE6720 Gene expression in OsRR6-overexpression line
15.4 98.7 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
14.4 98.6 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 2e-146 519 Os03g0126000 AK121680.1 - Glycosyl transferase, family 3 domain containingprotein 8e-1 At5g17990 TRP1 (tryptophan biosynthesis 1) C.G. S.X.
0.06 1e-5 52 Os06g0557600 AK107835.1 - Hypothetical protein 1e+0 At1g15770 unknown protein C.G. S.X.
0.05 3e-6 54 Os03g0106000 AK063343.1 - Protein of unknown function UPF0187 family protein 4e-15 At3g61320 unknown protein C.G. S.X.
0.02 1e-11 71 Os07g0235200 AK120395.1 - Protein of unknown function DUF296 domaincontaining protein 2e+0 At1g04800 glycine-rich protein C.G. S.X.
0.02 8e-7 56 Os02g0281200 AK063172.1 - Disease resistance protein family protein 5e-1 At2g33630 3-beta hydroxysteroid dehydrogenase/isomerase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At4g35320 829686 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.02 2e+0 34 Glycine max GmaAffx.47222.1.S1_at BU760787 - - 4e-1 At3g09830 protein kinase, putative C.G. S.X.
0.03 3e+0 32 Hordeum vulgare Contig24637_at Contig24637 - - 1e+0 At4g00840 zinc ion binding C.G. S.X.
0.03 1e-1 38 Populus trichocarpa PtpAffx.213314.1.S1_at pmrna26039 hypothetical protein - 4e-101 Atmg00370 - C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.5746.1.S1_x_at BJ288879 - - 2e-11 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1616666_at CF403684 hypothetical protein LOC100249984 - 2e-8 At2g30160 mitochondrial substrate carrier family protein C.G. S.X.
0.03 2e-1 36 Zea mays Zm.6262.1.A1_at AY104073.1 - - 1e-2 At5g12970 C2 domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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