CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os09g0259366

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os09g0259366 9637.m00619 - - 6e+0 At5g60400 unknown protein S.X. H.G.
0.67 87.2 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.50 68.0 Os03g0566900 NM_184753.1 - - 1e+0 At3g11600 unknown protein S.X. H.G.
0.50 68.0 Os07g0456000 9635.m02632 - - 1e+0 At4g27150 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 S.X. H.G.
0.50 68.0 Os03g0622400 9631.m04085 - Conserved hypothetical protein 4e+0 At5g05370 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative S.X. H.G.
0.40 51.1 Os03g0638100 9631.m04211 - - 3e+0 At2g22470 AGP2 (ARABINOGALACTAN PROTEIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
116.9 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
51.3 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.9 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.9 99.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.0 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.9 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.9 98.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 7e-23 109 Os08g0242300 9636.m01438 - - 5e-1 At2g42540 COR15A (COLD-REGULATED 15A) C.G. S.X.
0.11 9e-7 56 Os06g0342600 AK110938.1 - Hypothetical protein 3e+0 At1g35290 thioesterase family protein C.G. S.X.
0.03 1e-5 52 Os01g0388200 AK063630.1 - Hypothetical protein 6e-1 At3g11325 acyltransferase C.G. S.X.
0.03 5e-5 50 Os06g0720000 AK068825.1 - Aspartate aminotransferase (EC 2.6.1.1)(Transaminase A) (ASPAT) 4e-1 At1g35890 DNA binding C.G. S.X.
0.01 8e-4 46 Os08g0184800 AK066827.1 - Hypothetical protein 3e-1 At1g72175 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e+0 32 Arabidopsis thaliana At5g60400 836162 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.psMC009xE23f_at PsAffx.psMC009xE23f - - 1e+1 At5g03550 - C.G. S.X.
0.03 5e-2 38 Hordeum vulgare Contig4015_at Contig4015 - - 2e-3 At4g02770 PSAD-1 (photosystem I subunit D-1) C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.223045.1.S1_at pmrna40837 hypothetical protein - 3e+0 At2g21730 CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) C.G. S.X.
0.03 4e-1 36 Triticum aestivum TaAffx.23064.1.S1_at CA740990 - - 3e-1 At4g22600 unknown protein C.G. S.X.
0.03 8e+0 30 Vitis vinifera 1622339_x_at CF202134.1 - - 1e+0 At3g46206 unknown protein C.G. S.X.
0.03 1e-2 40 Zea mays Zm.18283.1.A1_at BG841297 hypothetical protein LOC100217202 /// hypothetical protein LOC100217213 - 5e+0 At5g49540 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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