Gene omics information

Query gene ID Os08g0563200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os08g0563200AK110263.1-Protein of unknown function DUF296 domaincontaining protein2e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)S.X.H.G.
0.6079.7Os01g0297200AK109883.1-AAA ATPase, central region domain containingprotein6e-5At4g25835AAA-type ATPase family proteinS.X.H.G.
0.5068.0Os11g0152700AK102690.1-Transcription factor HBP-1b(C38) (Fragment)3e-1At1g77920bZIP family transcription factorS.X.H.G.
0.4051.1Os11g0700500AK111626.1-Myb, DNA-binding domain containing protein1e-8At5g59780MYB59 (MYB DOMAIN PROTEIN 59)S.X.H.G.
0.3338.8Os12g0639200AK122160.1-AAA ATPase, central region domain containingprotein4e-3At4g05380AAA-type ATPase family proteinS.X.H.G.
0.3338.8Os05g0278500AK067851.1-Transferase family protein2e-1At1g06980unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.599.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
17.898.9GSM262019Nipponbare, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.898.7GSM262014Nipponbare, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.298.5GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.598.5GSM262018Nipponbare, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.898.4GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
12.598.3GSM359908IR29 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
11.798.2GSM262015Nipponbare, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.298.2GSM431931Root- -Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
11.298.2GSM262006IAC165, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.451e-87325Os07g0235200AK120395.1-Protein of unknown function DUF296 domaincontaining protein2e+0At1g04800glycine-rich proteinC.G.S.X.
0.336e-120432Os02g08208009630.m05730-Protein of unknown function DUF296 domaincontaining protein3e-2At4g14465DNA-binding protein-relatedC.G.S.X.
0.262e-1895Os02g04480009630.m02338-Protein of unknown function DUF296 domaincontaining protein8e-6At4g22810DNA-binding protein-relatedC.G.S.X.
0.213e-35151Os03g0270000AK106069.1-Protein of unknown function DUF296 domaincontaining protein3e-3At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)C.G.S.X.
0.153e-23111Os02g07137009630.m04710-Protein of unknown function DUF296 domaincontaining protein3e+0At5g03240UBQ3 (POLYUBIQUITIN 3)C.G.S.X.
0.112e-1171Os08g0159700AK109080.1-Protein of unknown function DUF296 domaincontaining protein6e-1At2g41225unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Arabidopsis thalianaAt1g76500843983SOB3 (SUPPRESSOR OF PHYB-4#3)Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light---C.G.S.X.
0.133e-1687Glycine maxGmaAffx.91953.1.S1_s_atCF807678--1e+0At2g21870unknown proteinC.G.S.X.
0.062e-1169Hordeum vulgareContig23110_atContig23110--1e+0At4g38000Dof-type zinc finger domain-containing proteinC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.201518.1.S1_atpmrna2994hypothetical protein-2e-1At2g42940DNA-binding family proteinC.G.S.X.
0.101e-1481Triticum aestivumTaAffx.16883.1.S1_atCA660700--4e+0At1g0110060S acidic ribosomal protein P1 (RPP1A)C.G.S.X.
0.043e-652Vitis vinifera1621103_atCB003423--2e-12At3g04570DNA-binding protein-relatedC.G.S.X.
0.032e-240Zea maysZm.4669.1.S1_atAI737897Growth-regulating factor 9-like-5e-5At3g52910AtGRF4 (GROWTH-REGULATING FACTOR 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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