CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0543100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os08g0543100 9636.m04377 - Disease resistance protein family protein 1e-1 At2g07340 prefoldin-related KE2 family protein S.X. H.G.
0.55 73.7 Os07g0610400 9635.m04199 - - 6e+0 At4g25890 60S acidic ribosomal protein P3 (RPP3A) S.X. H.G.
0.55 73.7 Os12g0129000 9640.m00264 - Eukaryotic protein of unknown function DUF872family protein 3e-1 At5g65350 histone H3 S.X. H.G.
0.50 68.0 Os02g0282500 9630.m01709 - NBS-LRR protein (Fragment) 3e-1 At1g32990 PRPL11 (PLASTID RIBOSOMAL PROTEIN L11) S.X. H.G.
0.50 68.0 Os02g0704800 BM420590 - Ornithine carbamoyltransferase OOCT1 (EC 2.1.3.3) 2e+0 At1g52680 late embryogenesis abundant protein-related / LEA protein-related S.X. H.G.
0.40 51.1 Os09g0436300 AK103151.1 - Peptidase, trypsin-like serine and cysteineproteases domain containing protein 8e-1 At5g22610 F-box family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
134.0 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.9 99.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.5 97.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.4 97.9 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
7.9 97.6 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.9 96.5 GSM262004 IAC165, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.5 96.3 GSM262016 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.4 96.2 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
3.9 95.8 GSM262017 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
3.5 95.3 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 2e-85 319 Os08g0542200 AK099583.1 - - 4e-1 At5g03070 IMPA-9 (IMPORTIN ALPHA ISOFORM 9) C.G. S.X.
0.17 1e-132 476 Os08g0543500 AK121394.1 - Disease resistance protein family protein 2e+0 At5g47740 - C.G. S.X.
0.17 1e-76 289 Os08g0543000 9636.m04375 - NBS-LRR type resistance protein (Fragment) 5e-1 At3g33520 ATARP6 C.G. S.X.
0.15 7e-20 101 Os02g0307700 9630.m01960 - - 4e+0 At2g10920 unknown protein C.G. S.X.
0.07 2e-11 73 Os02g0307400 9630.m01958 - - 1e+0 At5g55710 - C.G. S.X.
0.02 4e-6 56 Os05g0414300 AK120513.1 - Disease resistance protein family protein 9e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 40 Arabidopsis thaliana At2g07340 815304 prefoldin-related KE2 family protein F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFAPO - - - C.G. S.X.
0.01 3e+0 36 Glycine max HgAffx.3169.1.A1_at CK350045 - - 5e-2 At1g31240 DNA binding C.G. S.X.
0.05 9e-4 46 Hordeum vulgare AF032687_at AF032687 - - 2e+0 At3g52130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.01 4e-2 42 Populus trichocarpa PtpAffx.224258.1.S1_at pmrna42653 cc-nbs-lrr resistance protein - 5e-1 At3g29575 AFP3 (ABI FIVE BINDING PROTEIN 3) C.G. S.X.
0.09 2e-9 65 Triticum aestivum TaAffx.110851.1.S1_at CA652984 - - 1e+0 At1g68500 unknown protein C.G. S.X.
0.01 5e-1 36 Vitis vinifera 1614271_at CF514962 hypothetical protein LOC100244832 - 1e+0 At3g27630 unknown protein C.G. S.X.
0.01 3e-3 44 Zea mays ZmAffx.836.1.A1_at AI770581 - - 2e-1 At3g24350 SYP32 (SYNTAXIN OF PLANTS 32) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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