CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0517800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0517800 9636.m04110 - Thaumatin, pathogenesis-related family protein 6e-4 At4g38670 pathogenesis-related thaumatin family protein S.X. H.G.
0.67 87.2 Os11g0482900 9639.m02647 - - 2e+1 At5g63905 unknown protein S.X. H.G.
0.56 76.3 Os10g0576200 9638.m03896 - - 8e-1 At2g28920 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.53 71.3 Os08g0361500 9636.m02697 - - 2e-1 At3g09230 AtMYB1 (myb domain protein 1) S.X. H.G.
0.39 48.3 Os07g0510600 AK105478.1 - Conserved hypothetical protein 3e-3 At3g21800 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) S.X. H.G.
0.36 44.0 Os12g0547000 9640.m03491 - - 4e+0 At2g37530 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
326.1 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
75.1 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
3.9 95.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.4 93.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.4 93.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.3 93.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.8 91.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.5 89.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.4 88.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.3 87.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 7e-70 266 Os10g0524900 9638.m03422 - - 3e-1 At2g21660 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) C.G. S.X.
0.19 3e-38 161 Os09g0536300 9637.m03081 - Thaumatin, pathogenesis-related family protein 9e-9 At4g36010 pathogenesis-related thaumatin family protein C.G. S.X.
0.18 2e-33 145 Os10g0146200 AK109913.1 - Thaumatin-like protein 1e-5 At1g20030 pathogenesis-related thaumatin family protein C.G. S.X.
0.16 2e-45 184 Os10g0147200 AK111104.1 - Pathogenesis-related protein 5 precursor (PR-5) 2e-1 At4g38670 pathogenesis-related thaumatin family protein C.G. S.X.
0.13 1e-58 228 Os09g0498200 AK072354.1 - Conserved hypothetical protein 3e-7 At1g75050 - C.G. S.X.
0.12 1e-18 95 Os03g0243900 9631.m01339 - Thaumatin-like protein 1e-5 At1g75050 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 6e-4 46 Arabidopsis thaliana At4g38670 830023 pathogenesis-related thaumatin family protein F:unknown;P:response to other organism;C:unknown;PMFBOV - - - C.G. S.X.
0.11 2e-4 48 Glycine max Gma.8330.1.S1_at BU550645 - - 4e-11 At1g20030 pathogenesis-related thaumatin family protein C.G. S.X.
0.09 2e-14 79 Hordeum vulgare Contig10004_at Contig10004 - - 4e-13 At1g20030 pathogenesis-related thaumatin family protein C.G. S.X.
0.05 5e-2 40 Populus trichocarpa PtpAffx.210370.1.S1_at pmrna20380 hypothetical protein - 4e-32 At5g24620 thaumatin-like protein, putative C.G. S.X.
0.17 7e-13 75 Triticum aestivum TaAffx.67423.1.S1_at BQ805669 - - 2e-3 At1g75050 - C.G. S.X.
0.06 3e-3 42 Vitis vinifera 1607225_at CB914105 hypothetical protein LOC100264253 - 1e-3 At1g75050 - C.G. S.X.
0.14 5e-21 101 Zea mays Zm.12137.1.S1_at CO524051 thaumatin-like protein 1 - 2e-1 At4g36010 pathogenesis-related thaumatin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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