CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0517200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os08g0517200 AK058787.1 - Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) 1e-39 At4g29900 ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) S.X. H.G.
0.30 32.7 Os10g0524400 AK108768.1 - Phospholipase D (EC 3.1.4.4) 2e-19 At4g11840 PLDGAMMA3 S.X. H.G.
0.25 24.1 Os02g0721800 AK100043.1 - Phosphatidylinositol transfer-like protein IV 2e-9 At1g75370 SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative S.X. H.G.
0.21 17.9 Os07g0409900 AF194414.2 - Protein kinase domain containing protein 6e-33 At2g17890 CPK16 S.X. H.G.
0.19 15.1 Os06g0229200 AK070606.1 - Glycosyl transferase, family 31 protein 7e-9 At1g26810 GALT1 (GALACTOSYLTRANSFERASE1) S.X. H.G.
0.17 12.6 Os07g0511000 AK070461.1 - Conserved hypothetical protein 2e-2 At5g55060 unknown protein S.X. H.G.
0.13 8.2 Os02g0545000 AK062923.1 - Dilute domain containing protein 1e+0 At1g21900 emp24/gp25L/p24 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.8 98.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.7 96.4 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.6 96.3 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
4.4 96.2 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
4.2 96.0 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
4.2 96.0 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
4.1 96.0 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
4.0 95.9 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
3.8 95.7 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.8 95.7 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 7e-27 123 Os02g0176700 9630.m00757 - Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) 4e-47 At3g21180 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) C.G. S.X.
0.12 4e-36 155 Os04g0605500 AK120057.1 - Calcium-transporting ATPase 8, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) 3e-30 At3g21180 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) C.G. S.X.
0.06 9e-11 69 Os03g0616400 AK071938.1 - Plasma membrane Ca2+-ATPase 4e-26 At2g22950 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) C.G. S.X.
0.05 9e-11 69 Os03g0203700 AK121250.1 - Plasma membrane Ca2+-ATPase 1e-63 At4g37640 ACA2 (CALCIUM ATPASE 2) C.G. S.X.
0.04 2e-8 61 Os11g0140400 9640.m00336 - Calcium-translocating P-type ATPase, PMCA-typefamily protein 2e-24 At3g57330 ACA11 (autoinhibited Ca2+-ATPase 11) C.G. S.X.
0.04 9e-8 59 Os12g0586600 AK100436.1 - Plasma membrane Ca2+-ATPase 2e-59 At2g22950 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 4e-50 200 Arabidopsis thaliana At5g57110 835815 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. - - - C.G. S.X.
0.15 2e-77 291 Glycine max Gma.541.1.S1_at AW156279 - - 5e-70 At5g57110 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) C.G. S.X.
0.48 0 1322 Hordeum vulgare Contig9475_at Contig9475 - - 1e-33 At4g29900 ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) C.G. S.X.
0.24 6e-34 147 Populus trichocarpa PtpAffx.86362.1.S1_s_at CV274254 autoinhibited calcium ATPase /// autoinhibited calcium ATPase - 8e-86 At3g21180 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) C.G. S.X.
0.53 0 745 Triticum aestivum Ta.9178.1.S1_at CD452861 - - 7e-17 At4g29900 ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) C.G. S.X.
0.20 9e-39 161 Vitis vinifera 1614028_at CB976052 hypothetical protein LOC100259808 - 1e-55 At5g57110 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) C.G. S.X.
0.26 4e-88 325 Zea mays Zm.14353.1.A1_at CA399617 - - 2e-4 At5g57110 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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