CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0492100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.40 51.1 Os08g0492100 AK071053.1 - Paraneoplastic encephalomyelitis antigen familyprotein 5e-8 At3g13224 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.53 71.3 Os05g0427300 AK073321.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 1e-2 At5g13050 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) S.X. H.G.
0.44 58.1 Os09g0360400 AK071395.1 - Conserved hypothetical protein 2e-3 At1g67770 TEL2 (TERMINAL EAR1-LIKE 2) S.X. H.G.
0.43 55.4 Os04g0457800 AK105892.1 - Somatic embryogenesis receptor kinase 1 1e-49 At4g33430 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE) S.X. H.G.
0.36 44.0 Os06g0681700 AK104993.2 - Conserved hypothetical protein 1e+0 At3g07080 membrane protein S.X. H.G.
0.19 15.1 Os02g0574900 AK073087.1 - Cyclin-like F-box domain containing protein 4e+0 At3g45275 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.0 97.6 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.9 97.6 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
7.7 97.6 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
7.4 97.5 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.3 97.5 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
7.0 97.4 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
6.9 97.3 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
6.9 97.3 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
6.7 97.3 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
6.6 97.3 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 0 1203 Os08g0492000 AK100814.1 - Oligopeptide transporter OPT superfamily protein 6e-21 At5g55930 OPT1 (OLIGOPEPTIDE TRANSPORTER 1) C.G. S.X.
0.10 5e-47 190 Os08g0320200 AK072608.1 - Oligopeptide transporter OPT superfamily protein 1e-9 At5g55930 OPT1 (OLIGOPEPTIDE TRANSPORTER 1) C.G. S.X.
0.09 4e-4 48 Os08g0320100 AK104999.2 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 3e-6 At5g40490 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.04 1e-10 69 Os04g0594800 AK070801.1 - Oligopeptide transporter OPT superfamily protein 3e-4 At5g64410 OPT4 (OLIGOPEPTIDE TRANSPORTER 4) C.G. S.X.
0.02 5e-4 48 Os06g0127700 AK072617.1 - - 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
0.02 6e-3 44 Os09g0359900 AK105521.1 - Conserved hypothetical protein 7e-1 At4g14000 unknown protein C.G. S.X.
0.02 2e-2 42 Os03g0306700 AK109929.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 2e-1 At2g27250 CLV3 (CLAVATA3) C.G. S.X.
0.02 2e-2 42 Os07g0632800 NM_193100.1 - Protein kinase domain containing protein 1e-48 At1g14000 VIK (VH1-INTERACTING KINASE) C.G. S.X.
0.01 5e-4 48 Os03g0751100 BU673383 - - 5e-28 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
0.01 5e-4 48 Os06g0127600 AK073855.1 - Conserved hypothetical protein 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-8 59 Arabidopsis thaliana At3g13224 820515 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBA - - - C.G. S.X.
0.03 3e-1 38 Glycine max GmaAffx.33636.1.S1_at BU927076 - - 9e-4 At1g17640 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.25 4e-38 159 Hordeum vulgare Contig16295_at Contig16295 - - 3e-1 At3g01740 - C.G. S.X.
0.11 1e-9 65 Populus trichocarpa PtpAffx.201300.1.S1_s_at pmrna2582 hypothetical protein - 1e-34 At3g13224 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.58 2e-140 500 Triticum aestivum Ta.5338.1.S1_at CD453726 - - 5e-8 At3g13224 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.11 2e-13 75 Vitis vinifera 1621900_s_at CD798424 hypothetical protein LOC100246013 - 3e-49 At3g13224 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.50 6e-132 470 Zea mays Zm.14455.1.S1_at CD446715 hypothetical protein LOC100217268 - 5e-5 At5g40490 RNA recognition motif (RRM)-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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