CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0454500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0454500 9636.m03547 - Flavonoid 7-O-methyltransferase (EC 2.1.1.6) 8e+0 At5g05380 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) S.X. H.G.
0.61 81.2 Os03g0658400 9631.m04412 - - 6e+0 At2g16019 unknown protein S.X. H.G.
0.55 73.7 Os11g0552300 9639.m03151 - - 1e-1 At5g60680 unknown protein S.X. H.G.
0.50 68.0 Os06g0181900 AK111463.1 - Hypothetical protein 7e-2 At1g27110 binding S.X. H.G.
0.50 68.0 Os06g0479800 9634.m02732 - - 3e+0 At5g37415 sequence-specific DNA binding / transcription factor S.X. H.G.
0.44 58.1 Os06g0111901 NM_185397.1 - - 3e-1 At1g71740 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
54.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.6 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.46 4e-71 270 Os08g0169300 9636.m00661 - O-methyltransferase, family 2 domain containingprotein 5e-1 At1g62900 O-methyltransferase, putative C.G. S.X.
0.06 2e-2 42 Os11g0235500 9639.m01223 - Herbicide safener binding protein 2e+0 At1g64840 F-box family protein C.G. S.X.
0.05 3e-4 48 Os07g0462800 9635.m02703 - - 2e+0 At5g01840 OFP1 (OVATE FAMILY PROTEIN 1) C.G. S.X.
0.05 2e-2 42 Os06g0240800 9634.m01319 - O-methyltransferase, family 2 domain containingprotein 2e+0 At1g66080 unknown protein C.G. S.X.
0.03 7e-5 50 Os11g0305400 9639.m01877 - O-methyltransferase, family 2 protein 2e+0 At3g13630 unknown protein C.G. S.X.
0.03 3e-4 48 Os11g0303600 AK061247.1 - O-methyltransferase, family 2 domain containingprotein 1e+1 At5g17360 - C.G. S.X.
0.03 3e-4 48 Os11g0304000 9639.m01859 - O-methyltransferase 9e-1 At3g16190 isochorismatase hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Arabidopsis thaliana At5g05380 830420 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMFO - - - C.G. S.X.
0.03 3e+0 34 Glycine max GmaAffx.87388.1.S1_at BI426445 - - 1e+0 At5g20500 glutaredoxin, putative C.G. S.X.
0.05 1e-3 44 Hordeum vulgare Contig5038_at Contig5038 - - 3e+0 At1g62900 O-methyltransferase, putative C.G. S.X.
0.03 5e-2 40 Populus trichocarpa PtpAffx.205565.1.S1_at pmrna11000 - - 6e-9 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
0.09 3e-2 40 Triticum aestivum Ta.2001.1.S1_at BE423504 - - 3e+0 At1g22330 RNA binding / nucleic acid binding / nucleotide binding C.G. S.X.
0.04 6e-1 34 Vitis vinifera 1621151_at CB971601 hypothetical protein LOC100260643 - 3e-1 At3g07260 forkhead-associated domain-containing protein / FHA domain-containing protein C.G. S.X.
0.02 2e-4 46 Zea mays Zm.1544.1.A1_a_at BM340714 herbicide safener binding protein1 - 3e+0 At4g21190 emb1417 (embryo defective 1417) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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