Gene omics information

Query gene ID	Os08g0445700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	60.9	Os08g0445700	AK072132.1	-	Glycosyl transferase, family 20 domain containingprotein	4e-1	At1g68020	ATTPS6	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.70	88.4	Os04g0412300	AK110902.1	-	Glycoside hydrolase, family 17 protein	3e+0	At5g42100	ATBG_PAP	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.64	83.4	Os01g0905200	AK067779.1	-	Exo70 exocyst complex subunit family protein	3e-1	At1g06250	lipase class 3 family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os04g0447100	9632.m03516	-	Lipoxygenase	2e-5	At1g72520	lipoxygenase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.53	71.3	Os01g0194000	AK058353.1	-	Conserved hypothetical protein	2e-2	At3g29000	calcium-binding EF hand family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.47	62.3	Os01g0675800	AK105493.1	-	No apical meristem (NAM) protein domain containingprotein	3e+0	At2g01640	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.42	53.9	Os03g0264300	NM_187446.1	-	Protein kinase domain containing protein	4e-5	At1g16670	protein kinase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.38	46.9	Os04g0464900	CB666636	-	Cyclin-like F-box domain containing protein	1e+0	At4g08967	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.35	41.7	Os04g0586500	AK106447.1	-	Conserved hypothetical protein	4e+0	At3g51550	FER (FERONIA)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.5	99.9	GSM375766	gid1-3_ shoot_replicate 2	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
39.0	99.9	GSM375767	gid1-3_ shoot_replicate 3	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
29.4	99.7	GSM375765	gid1-3_ shoot_replicate 1	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
9.9	98.0	GSM375769	gid2-1_ shoot_replicate 1	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
9.8	98.0	GSM159191	Young inflorescence (P1, upto 3 cm), biological rep 3	GSE6893	Expression data for reproductive development in rice
9.8	98.0	GSM375772	gid2-1_ shoot_replicate 3	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
9.8	98.0	GSM159189	Young inflorescence (P1, upto 3 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
9.7	98.0	GSM159200	Inflorescence (P4, 10 - 15 cm), biological rep 3	GSE6893	Expression data for reproductive development in rice
8.8	97.8	GSM375647	Taichung 65_shoot_replicate 1	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice
8.8	97.8	GSM375770	gid2-1_ shoot_replicate 2	GSE15046	Transcriptome analysis of gibberellin-signaling mutants in rice

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-48	196	Os02g0790500	AK066691.1	-	Glycosyl transferase, family 20 domain containingprotein	3e-11	At1g68020	ATTPS6	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	7e-19	97	Os03g0224300	AK100541.1	-	Glycosyl transferase, family 20 domain containingprotein	7e-9	At1g68020	ATTPS6	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.07	3e-9	65	Os09g0397300	AK105382.1	-	Glycosyl transferase, family 20 domain containingprotein	7e-28	At1g68020	ATTPS6	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	1e-5	54	Os01g0730300	AK109542.1	-	Glycosyl transferase, family 20 domain containingprotein	2e-15	At1g70290	ATTPS8	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	6e-4	48	Os04g0382200	AK103564.1	-	Exo70 exocyst complex subunit family protein	2e-2	At1g62240	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e-3	46	Os01g0873700	AK103484.1	-	Protein of unknown function DUF803 family protein	2e-10	At4g38730	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e-3	46	Os05g0517200	AK072066.1	-	Glycosyl transferase, family 20 domain containingprotein	3e-11	At1g06410	ATTPS7	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-1	38	Arabidopsis thaliana	At1g68020	843130	ATTPS6	Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	8e-6	54	Glycine max	Gma.8147.2.S1_a_at	BU547713	-	-	4e-13	At1g70290	ATTPS8	C.G.	S.X.	Please select
0.14	1e-14	81	Hordeum vulgare	Contig3373_s_at	Contig3373	-	-	5e-5	At2g18700	ATTPS11	C.G.	S.X.	Please select
0.02	2e+0	36	Populus trichocarpa	PtpAffx.33775.1.S1_at	DN486657	hypothetical protein	-	1e-24	At1g68020	ATTPS6	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	2e-64	248	Triticum aestivum	Ta.14558.1.S1_at	BT009244.1	-	-	2e-5	At4g17770	ATTPS5	C.G.	S.X.	Please select
0.01	2e+0	34	Vitis vinifera	1608440_at	CF207598	hypothetical protein LOC100252552	-	8e-43	At1g68020	ATTPS6	C.G.	S.X.	Please select
0.10	1e-5	52	Zea mays	Zm.4623.1.S1_x_at	AI372203	Hypothetical protein LOC100217143	-	6e-2	At1g68020	ATTPS6	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0005992	The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.
L	GO:0008152	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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