CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0432500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0432500 AK106170.1 - ATP-dependent Clp protease adaptor protein ClpSfamily protein 3e-2 At3g61678 unknown protein S.X. H.G.
0.60 79.7 Os03g0744700 AK071178.1 - Conserved hypothetical protein 4e-2 At1g62250 unknown protein S.X. H.G.
0.55 73.7 Os11g0603200 AK059060.1 - ABCF-type protein 1e-19 At5g64840 ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5) S.X. H.G.
0.53 71.3 Os05g0582300 AK101790.1 - Solanesyl diphosphate synthase 2e-17 At1g17050 SPS2 (Solanesyl diphosphate synthase 2) S.X. H.G.
0.47 62.3 Os01g0666600 CF325024 - Conserved hypothetical protein 5e+0 At3g58380 meprin and TRAF homology domain-containing protein / MATH domain-containing protein S.X. H.G.
0.43 55.4 Os04g0657300 CB624212 - Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1) 2e-1 At1g68552 CPuORF53 (Conserved peptide upstream open reading frame 53) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.9 99.1 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
14.6 98.6 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
14.4 98.6 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.4 98.5 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.1 98.3 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.8 98.1 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.3 98.1 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.7 98.0 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.1 97.9 GSM421722 MOCK, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-2 40 Os11g0215200 9639.m01036 - - 5e-2 At4g19270 unknown protein C.G. S.X.
0.01 2e-1 38 Os02g0788600 9630.m05426 - Hypothetical protein 1e+0 At1g31750 proline-rich family protein C.G. S.X.
0.01 2e-1 38 Os07g0192700 AK109791.1 - AAA ATPase, central region domain containingprotein 1e-2 At4g25835 AAA-type ATPase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 40 Arabidopsis thaliana At3g61678 6240667 unknown protein F:unknown;P:unknown;C:unknown - - - C.G. S.X.
0.17 7e-4 46 Glycine max GmaAffx.90716.1.S1_at CF806441 - - 1e+0 At1g72240 unknown protein C.G. S.X.
0.20 3e-34 145 Hordeum vulgare HV_CEa0014I08r2_s_at HV_CEa0014I08r2 - - 2e+1 At5g27238 - C.G. S.X.
0.21 2e-13 77 Populus trichocarpa Ptp.5771.1.S1_at CF235182 hypothetical protein - 8e-21 At1g68660 - C.G. S.X.
0.31 2e-59 230 Triticum aestivum Ta.7722.3.S1_a_at BE213326 - - 2e+0 At3g52210 mRNA capping enzyme family protein C.G. S.X.
0.13 9e-6 50 Vitis vinifera 1618153_at BQ797474 hypothetical protein LOC100242343 - 1e-22 At1g68660 - C.G. S.X.
0.39 2e-100 365 Zea mays Zm.744.1.A1_at BM332523 ATP-dependent Clp protease adaptor protein ClpS containing protein - 5e+0 At5g39700 MYB89 (myb domain protein 89) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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