CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0432000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os08g0432000 AK066449.1 - Hypothetical protein 2e+0 At2g46780 RNA binding / nucleic acid binding / nucleotide binding S.X. H.G.
0.55 73.7 Os05g0543800 AK102850.1 - Hypothetical protein 4e+0 Atmg00720 - S.X. H.G.
0.50 68.0 Os04g0243400 AK070633.1 - Conserved hypothetical protein 4e+0 At5g26890 unknown protein S.X. H.G.
0.43 55.4 Os01g0933400 AK070303.1 - Hypothetical protein 7e-1 At1g21600 PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6) S.X. H.G.
0.43 55.4 Os10g0357700 AK106693.1 - Conserved hypothetical protein 9e-1 At4g39890 AtRABH1c (Arabidopsis Rab GTPase homolog H1c) S.X. H.G.
0.41 52.4 Os11g0579600 AK106009.1 - Conserved hypothetical protein 2e-1 At1g76070 unknown protein S.X. H.G.
0.41 52.4 Os11g0689800 AK119600.1 - Conserved hypothetical protein 9e-1 At5g05420 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative S.X. H.G.
0.36 44.0 Os10g0388500 AK120894.1 - - 4e+0 At5g37200 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.36 44.0 Os08g0355500 AK106035.1 - Conserved hypothetical protein 5e-1 At5g23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein S.X. H.G.
0.34 40.0 Os12g0179700 AK120612.1 - Hypothetical protein 1e+0 At2g01464 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.2 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
16.8 98.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.7 98.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.2 98.7 GSM195223 Ovary 3, biological rep 3 GSE7951 Genome-wide gene expression profiling of rice stigma
12.5 98.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.3 98.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.3 98.2 GSM304677 Unstable mutant line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
10.9 98.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM195222 Ovary 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-39 165 Os08g0431900 AY345220.1 - Transcription factor MADS23 6e-6 At3g57230 AGL16 (AGAMOUS-LIKE 16) C.G. S.X.
0.02 1e-9 67 Os06g0569700 AK119285.1 - Conserved hypothetical protein 1e+0 At1g07840 leucine zipper factor-related C.G. S.X.
0.02 1e-9 67 Os10g0188100 AK071062.1 - Transcription initiation factor IIF, alpha subunitfamily protein 2e-14 At4g12610 transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein C.G. S.X.
0.01 1e-3 48 Os01g0659200 AK071200.1 - H+-transporting two-sector ATPase, E subunitfamily protein 4e-27 At4g11150 TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1) C.G. S.X.
0.01 4e-3 46 Os01g0912900 AK119446.1 - Protein prenyltransferase domain containingprotein 3e-2 At5g16400 ATF2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Arabidopsis thaliana At2g46780 819291 RNA binding / nucleic acid binding / nucleotide binding F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA - - - C.G. S.X.
0.01 3e+0 36 Glycine max HgAffx.8349.1.S1_at CB380152 - - 5e+0 At3g49110 PRXCA (PEROXIDASE CA) C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig19663_at Contig19663 - - 9e-2 At5g03320 protein kinase, putative C.G. S.X.
0.01 6e-1 38 Populus trichocarpa Ptp.397.2.S1_s_at CN519838 hypothetical protein - 2e+0 At5g45590 unknown protein C.G. S.X.
0.01 1e-1 40 Triticum aestivum Ta.26888.1.A1_at CD491583 - - 3e+0 At2g35460 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1611009_at CB972297 hypothetical protein LOC100264948 - 4e-1 At1g54990 AXR4 (AUXIN RESISTANT 4) C.G. S.X.
0.01 3e+0 34 Zea mays Zm.8514.1.A1_at AY104758.1 PREG-like protein - 5e+0 At5g35525 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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