CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0426200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0426200 9636.m03305 - - 2e+0 At3g17580 unknown protein S.X. H.G.
0.91 98.9 Os04g0366500 9632.m02816 - - 1e+1 At3g51060 STY1 (STYLISH 1) S.X. H.G.
0.80 94.6 Os01g0528900 9629.m03236 - - 4e+0 At4g31150 endonuclease V family protein S.X. H.G.
0.80 94.6 Os01g0521100 9629.m03165 - Hypothetical protein 3e+0 At4g10420 - S.X. H.G.
0.73 91.1 Os10g0350100 NM_195936.1 - - 4e-1 At3g47710 bHLH family protein S.X. H.G.
0.67 87.2 Os04g0134700 9632.m00384 - - 1e+1 At5g58500 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
169.9 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
92.3 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
42.4 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.0 98.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.1 97.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.5 97.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 8e-69 262 Os01g0580500 AK102472.1 - 1-aminocyclopropane-1-carboxylate oxidase(Fragment) 3e-12 At1g05010 EFE (ETHYLENE-FORMING ENZYME) C.G. S.X.
0.14 3e-22 107 Os05g0129700 AF050180.1 - Homeobox protein rough sheath 1 3e-10 At1g62360 STM (SHOOT MERISTEMLESS) C.G. S.X.
0.08 6e-8 59 Os09g0407000 9637.m02067 - - 4e+0 At4g24400 CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) C.G. S.X.
0.05 3e-19 97 Os07g0685700 AB074972.1 - Ethylene insensitive 3 family protein 2e-2 At1g56170 NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At3g17580 821024 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 6e-1 36 Glycine max PsAffx.psZO005iE05r_s_at PsAffx.psZO005iE05r - - 2e+0 At3g48020 - C.G. S.X.
0.04 5e-2 38 Hordeum vulgare EBed02_SQ003_E04_at EBed02_SQ003_E04 - - 1e+0 At1g70850 MLP34 (MLP-LIKE PROTEIN 34) C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.3298.1.S1_at CK110786 - - 3e+0 Atmg00480 - C.G. S.X.
0.04 2e-3 44 Triticum aestivum TaAffx.8507.1.S1_at CA624248 - - 1e+0 At5g64200 ATSC35 C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1612315_at CB347014 hypothetical protein LOC100256046 - 3e-29 At5g50460 protein transport protein SEC61 gamma subunit, putative C.G. S.X.
0.09 1e-11 69 Zea mays Zm.1489.1.A1_at CO519381 1-aminocyclopropane-1-carboxylate oxidase 1 - 5e-8 At1g05010 EFE (ETHYLENE-FORMING ENZYME) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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