CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0425200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os08g0425200 AK099569.1 - Conserved hypothetical protein 1e-1 At4g11870 unknown protein S.X. H.G.
0.77 93.1 Os01g0272800 NM_188072.1 - Conserved hypothetical protein 6e-1 At3g58710 WRKY69 S.X. H.G.
0.73 91.1 Os02g0774100 9630.m05279 - Thioredoxin-related domain containing protein 4e-3 At5g06690 WCRKC1 (WCRKC THIOREDOXIN 1) S.X. H.G.
0.73 91.1 Os03g0748300 AK068519.1 - Galactose mutarotase-like domain containingprotein 5e-2 At3g15780 unknown protein S.X. H.G.
0.67 87.2 Os03g0679700 AK120238.1 - Thiamine biosynthesis protein thiC 3e-125 At2g29630 THIC (ThiaminC) S.X. H.G.
0.29 31.1 Os08g0139100 AK099590.1 - DAG protein, chloroplast precursor 7e-44 At1g11430 plastid developmental protein DAG, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.3 99.6 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
27.8 99.6 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
24.2 99.4 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
23.8 99.4 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
23.8 99.4 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
23.0 99.3 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
22.1 99.3 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
21.5 99.2 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
21.5 99.2 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.4 98.2 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-3 44 Os07g0175300 AK065521.1 - Hypothetical protein 3e-1 At3g04210 disease resistance protein (TIR-NBS class), putative C.G. S.X.
0.02 1e-3 46 Os01g0226200 NM_188558.1 - Conserved hypothetical protein 4e-2 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.02 4e-3 44 Os08g0509400 AK059210.1 - Glycoside hydrolase, family 1 protein 4e-3 At3g09260 PYK10 C.G. S.X.
0.01 4e-3 44 Os04g0682000 AK069012.1 - Autophagy 4a 2e-5 At3g59950 autophagy 4b (APG4b) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Arabidopsis thaliana At4g11870 826794 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBFMAP - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.3778.1.S1_at BF067565 - - 2e+0 At5g47180 vesicle-associated membrane family protein / VAMP family protein C.G. S.X.
0.32 2e-41 169 Hordeum vulgare HVSMEm0005N22r2_s_at HVSMEm0005N22r2 - - 4e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.03 7e-1 36 Populus trichocarpa PtpAffx.214066.1.S1_s_at pmrna27397 hypothetical protein - 2e-16 At4g32980 ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1) C.G. S.X.
0.27 2e-37 157 Triticum aestivum TaAffx.8444.1.S1_at BG904574 - - 2e-5 At4g04330 unknown protein C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1613965_at CF210779 hypothetical protein LOC100267561 - 1e-18 At3g04740 SWP (STRUWWELPETER) C.G. S.X.
0.03 2e-4 46 Zea mays Zm.12065.1.S1_at CD219268 hypothetical protein LOC100275823 - 5e-1 At5g52605 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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