CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0376300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os08g0376300 AK072348.1 - Protein kinase domain containing protein 4e-7 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) S.X. H.G.
0.15 10.3 Os12g0420300 AK071692.1 - Conserved hypothetical protein 2e-3 At4g03960 tyrosine specific protein phosphatase family protein S.X. H.G.
0.04 2.0 Os01g0812000 AK119607.1 - MYB8 5e-9 At4g26930 MYB97 (myb domain protein 97) S.X. H.G.
0.01 0.5 Os09g0509400 AK100887.1 - Conserved hypothetical protein 9e-2 At3g44261 unknown protein S.X. H.G.
0.00 0.1 Os07g0540200 AK105928.1 - Conserved hypothetical protein 1e+1 At5g60615 - S.X. H.G.
0.00 0.1 Os12g0271600 AK102333.1 - Myosin heavy chain-like 1e-3 At5g55860 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.2 99.7 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
27.9 99.6 GSM159204 Inflorescence (P6, 22 - 30 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
26.3 99.5 GSM159205 Inflorescence (P6, 22 - 30 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
24.1 99.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
20.6 99.1 GSM159206 Inflorescence (P6, 22 - 30 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
12.6 98.4 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
10.2 98.0 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.8 98.0 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
9.0 97.8 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.7 97.8 GSM409434 9311_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 4e-18 95 Os09g0326100 AK120843.1 - Protein kinase domain containing protein 6e-3 At5g65700 BAM1 (BARELY ANY MERISTEM 1) C.G. S.X.
0.09 1e-30 137 Os03g0228800 AK121286.1 - Protein kinase domain containing protein 3e-17 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.08 3e-16 89 Os11g0232100 AK105669.1 - Protein kinase domain containing protein 7e-3 At1g72180 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 4e-21 105 Os02g0228400 AK111683.1 - Conserved hypothetical protein 3e-4 At5g61350 protein kinase family protein C.G. S.X.
0.03 4e-18 95 Os05g0550800 9633.m04450 - Protein kinase domain containing protein 2e-3 At1g16110 WAKL6 (wall associated kinase-like 6) C.G. S.X.
0.03 3e-16 89 Os12g0595800 AK121185.1 - Protein kinase domain containing protein 8e-5 At2g23450 protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-7 57 Arabidopsis thaliana At3g13065 820494 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA - - - C.G. S.X.
0.02 6e-4 48 Glycine max Gma.16818.1.S1_x_at AF244889.1 receptor-like protein kinase 2 - 3e-51 At5g65700 BAM1 (BARELY ANY MERISTEM 1) C.G. S.X.
0.11 3e-25 117 Hordeum vulgare Contig10767_at Contig10767 - - 3e-15 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.01 4e-2 42 Populus trichocarpa Ptp.4270.1.S1_at DN499659 - - 8e-5 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.06 1e-19 99 Triticum aestivum TaAffx.109207.1.S1_at CA678684 - - 3e-4 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.02 1e-10 67 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.11 2e-25 117 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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